Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3983

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,647,786	+				+0.1
4,647,787	-				+0.5
4,647,796	+				-0.4
4,647,797	-				-0.1
4,647,797	-				+0.1
4,647,815	+				-0.1
4,647,815	+				-0.5
4,647,815	+				-0.5
4,647,816	-				+0.2
4,647,816	-				-0.1
4,647,816	-				+0.1
4,647,842	+				-1.2
4,647,842	+				-0.5
4,647,842	+				+1.1
4,647,842	+				+1.1
4,647,842	+				-0.5
4,647,842	+				-0.5
4,647,842	+				-0.5
4,647,843	-				+0.1
4,647,843	-				-0.5
4,647,843	-				-0.5
4,647,843	-				+1.1
4,647,865	+				-0.5
4,647,865	+				+1.1
4,647,865	+				+0.8
4,647,865	+				+1.1
4,647,902	+		Pf6N2E2_3982	0.13	-0.9
4,647,917	-		Pf6N2E2_3982	0.17	+1.1
4,648,195	+				+0.1
4,648,196	-				+0.1
4,648,358	+				+0.1
4,648,358	+				-2.2
4,648,359	-				-0.5
4,648,366	+				-0.5
4,648,366	+				-0.5
4,648,367	-				+1.1
4,648,367	-				+1.1
4,648,401	+				+0.1
4,648,401	+				-0.9
4,648,561	+				+0.3
4,648,561	+				-0.1
4,648,561	+				+1.1
4,648,561	+				+1.1
4,648,561	+				+1.1
4,648,562	-				+0.1
4,648,631	-		Pf6N2E2_3983	0.12	+0.3
4,648,632	+		Pf6N2E2_3983	0.12	+1.1
4,648,632	+		Pf6N2E2_3983	0.12	+1.1
4,648,632	+		Pf6N2E2_3983	0.12	+1.1
4,648,632	+		Pf6N2E2_3983	0.12	+0.1
4,648,632	+		Pf6N2E2_3983	0.12	-0.2
4,648,632	+		Pf6N2E2_3983	0.12	+0.1
4,648,632	+		Pf6N2E2_3983	0.12	-0.5
4,648,632	+		Pf6N2E2_3983	0.12	-0.5
4,648,632	+		Pf6N2E2_3983	0.12	+0.1
4,648,632	+		Pf6N2E2_3983	0.12	+1.1
4,648,633	-		Pf6N2E2_3983	0.12	-0.9
4,648,633	-		Pf6N2E2_3983	0.12	+0.1
4,648,633	-		Pf6N2E2_3983	0.12	+0.1
4,648,633	-		Pf6N2E2_3983	0.12	+0.5
4,648,633	-		Pf6N2E2_3983	0.12	+1.1
4,648,633	-		Pf6N2E2_3983	0.12	+1.1
4,648,633	-		Pf6N2E2_3983	0.12	+1.1
4,648,633	-		Pf6N2E2_3983	0.12	+1.1
4,648,653	+		Pf6N2E2_3983	0.13	+0.1
4,648,654	-		Pf6N2E2_3983	0.13	+0.3
4,648,654	-		Pf6N2E2_3983	0.13	-0.9
4,648,654	-		Pf6N2E2_3983	0.13	-0.4
4,649,055	+		Pf6N2E2_3983	0.33	+0.6
4,649,055	+		Pf6N2E2_3983	0.33	+0.1
4,649,103	+		Pf6N2E2_3983	0.35	+0.1
4,649,104	-		Pf6N2E2_3983	0.35	+1.1
4,649,587	-		Pf6N2E2_3983	0.60	+0.1
4,649,644	-		Pf6N2E2_3983	0.63	-0.5
4,649,644	-		Pf6N2E2_3983	0.63	-0.9
4,649,853	+		Pf6N2E2_3983	0.73	+1.1
4,649,853	+		Pf6N2E2_3983	0.73	+0.1
4,649,854	-		Pf6N2E2_3983	0.73	+0.9
4,649,854	-		Pf6N2E2_3983	0.73	+0.1
4,649,854	-		Pf6N2E2_3983	0.73	-0.9
4,649,854	-		Pf6N2E2_3983	0.73	-1.2
4,649,854	-		Pf6N2E2_3983	0.73	-0.4
4,649,854	-		Pf6N2E2_3983	0.73	+1.1
4,650,162	+		Pf6N2E2_3983	0.89	+0.8
4,650,162	+		Pf6N2E2_3983	0.89	+0.0
4,650,163	-		Pf6N2E2_3983	0.89	+1.1
4,650,288	+				+1.1
4,650,288	+				+1.1
4,650,289	-				+0.5
4,650,358	+				+1.1
4,650,359	-				+0.6
4,650,404	+				+0.1
4,650,404	+				-0.5
4,650,404	+				+0.1
4,650,404	+				+1.1
4,650,404	+				+0.1
4,650,404	+				+1.1
4,650,405	-				+0.1
4,650,405	-				+1.1
4,650,408	+				+0.1
4,650,409	-				-0.5
4,650,605	-		Pf6N2E2_3984	0.30	-1.7
4,650,632	+		Pf6N2E2_3984	0.35	-4.2
4,650,632	+		Pf6N2E2_3984	0.35	+1.1
4,650,632	+		Pf6N2E2_3984	0.35	+1.1
4,650,632	+		Pf6N2E2_3984	0.35	-4.2
4,650,633	-		Pf6N2E2_3984	0.35	+1.1
4,650,633	-		Pf6N2E2_3984	0.35	-0.5
4,650,633	-		Pf6N2E2_3984	0.35	+0.1
4,650,636	-		Pf6N2E2_3984	0.35	-0.9
4,650,636	-		Pf6N2E2_3984	0.35	-0.9
4,650,636	-		Pf6N2E2_3984	0.35	+1.1
4,650,636	-		Pf6N2E2_3984	0.35	+1.1
4,650,680	+		Pf6N2E2_3984	0.42	+1.1
4,650,681	-		Pf6N2E2_3984	0.42	+1.1
4,650,681	-		Pf6N2E2_3984	0.42	-0.5
4,650,731	+		Pf6N2E2_3984	0.49	-2.7
4,650,731	+		Pf6N2E2_3984	0.49	-2.0
4,650,731	+		Pf6N2E2_3984	0.49	-0.5
4,650,746	+		Pf6N2E2_3984	0.52	-0.5
4,650,746	+		Pf6N2E2_3984	0.52	+1.1
4,650,746	+		Pf6N2E2_3984	0.52	-3.7
4,650,746	+		Pf6N2E2_3984	0.52	+1.1
4,650,746	+		Pf6N2E2_3984	0.52	+1.1
4,650,746	+		Pf6N2E2_3984	0.52	-3.0
4,650,747	-		Pf6N2E2_3984	0.52	-0.4
4,650,747	-		Pf6N2E2_3984	0.52	+0.1
4,650,747	-		Pf6N2E2_3984	0.52	-2.0
4,650,836	+		Pf6N2E2_3984	0.65	+0.1
4,650,836	+		Pf6N2E2_3984	0.65	-0.5
4,650,836	+		Pf6N2E2_3984	0.65	+1.1
4,650,837	-		Pf6N2E2_3984	0.65	+1.1
4,650,837	-		Pf6N2E2_3984	0.65	+0.1
4,650,962	+		Pf6N2E2_3984	0.84	+1.1
4,650,962	+		Pf6N2E2_3984	0.84	-0.9
4,650,962	+		Pf6N2E2_3984	0.84	+0.1
4,650,962	+		Pf6N2E2_3984	0.84	+1.1
4,650,962	+		Pf6N2E2_3984	0.84	+0.1
4,650,963	-		Pf6N2E2_3984	0.84	+1.1
4,650,963	-		Pf6N2E2_3984	0.84	+0.1
4,650,963	-		Pf6N2E2_3984	0.84	+1.1
4,650,963	-		Pf6N2E2_3984	0.84	-2.6
4,650,963	-		Pf6N2E2_3984	0.84	-4.0
4,650,963	-		Pf6N2E2_3984	0.84	-1.1
4,650,963	-		Pf6N2E2_3984	0.84	-3.5
4,650,963	-		Pf6N2E2_3984	0.84	+1.1
4,650,963	-		Pf6N2E2_3984	0.84	+1.1
4,650,964	+		Pf6N2E2_3984	0.85	+1.1
4,650,964	+		Pf6N2E2_3984	0.85	-2.4
4,650,964	+		Pf6N2E2_3984	0.85	-0.5
4,650,964	+		Pf6N2E2_3984	0.85	+0.1
4,650,964	+		Pf6N2E2_3984	0.85	+1.1
4,650,964	+		Pf6N2E2_3984	0.85	+1.1
4,650,965	-		Pf6N2E2_3984	0.85	-3.3
4,650,965	-		Pf6N2E2_3984	0.85	+1.1
4,650,965	-		Pf6N2E2_3984	0.85	+0.1
4,650,965	-		Pf6N2E2_3984	0.85	-0.5
4,650,965	-		Pf6N2E2_3984	0.85	+1.1
4,651,054	+				+1.1
4,651,055	-				-0.5
4,651,055	-				+1.1
4,651,103	-				-1.0
4,651,103	-				-0.4
4,651,154	+				+0.1
4,651,193	-				+0.5
4,651,199	+				+1.1
4,651,199	+				-0.4
4,651,199	+				-0.5
4,651,199	+				+1.1
4,651,200	-				+0.2
4,651,250	+				+1.1
4,651,250	+				+1.1
4,651,250	+				+1.1
4,651,251	-				-0.6