Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3972

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,620,741	+		Pf6N2E2_3971	0.37	-0.3
4,620,765	-		Pf6N2E2_3971	0.39	+1.1
4,620,765	-		Pf6N2E2_3971	0.39	+1.1
4,620,823	+		Pf6N2E2_3971	0.43	+0.2
4,620,824	-		Pf6N2E2_3971	0.43	+0.1
4,620,978	+		Pf6N2E2_3971	0.54	+1.1
4,620,979	-		Pf6N2E2_3971	0.54	-0.9
4,620,979	-		Pf6N2E2_3971	0.54	+1.1
4,621,479	+		Pf6N2E2_3971	0.89	+0.1
4,621,480	-		Pf6N2E2_3971	0.89	-0.2
4,621,563	+				+0.2
4,621,564	-				-0.7
4,621,882	+		Pf6N2E2_3972	0.51	-0.5
4,621,882	+		Pf6N2E2_3972	0.51	-0.9
4,621,882	+		Pf6N2E2_3972	0.51	-0.4
4,621,882	+		Pf6N2E2_3972	0.51	+1.1
4,621,882	+		Pf6N2E2_3972	0.51	+0.1
4,621,882	+		Pf6N2E2_3972	0.51	-1.4
4,621,883	-		Pf6N2E2_3972	0.51	+0.1
4,621,883	-		Pf6N2E2_3972	0.51	+0.1
4,621,883	-		Pf6N2E2_3972	0.51	+1.1
4,621,883	-		Pf6N2E2_3972	0.51	+1.1
4,621,883	-		Pf6N2E2_3972	0.51	-1.6
4,621,883	-		Pf6N2E2_3972	0.51	-0.5
4,621,883	-		Pf6N2E2_3972	0.51	+1.1
4,621,891	+		Pf6N2E2_3972	0.52	-0.9
4,621,891	+		Pf6N2E2_3972	0.52	+1.1
4,621,891	+		Pf6N2E2_3972	0.52	+0.1
4,621,892	-		Pf6N2E2_3972	0.53	+1.1
4,622,074	+		Pf6N2E2_3972	0.90	-0.2
4,622,074	+		Pf6N2E2_3972	0.90	+0.1
4,622,208	-				-0.0
4,622,211	+				+1.1
4,622,211	+				-0.9
4,622,380	-				-0.4
4,622,436	+				+0.1
4,622,436	+				+0.7
4,622,457	+				-0.4
4,622,498	-				-1.2
4,622,548	+				+0.1
4,622,564	-				-2.5
4,622,564	-				+0.4
4,622,564	-				+1.1
4,622,580	+				+0.1
4,622,580	+				+1.1
4,622,580	+				+0.1
4,622,581	-				-0.5
4,622,581	-				+0.8
4,622,581	-				+1.1
4,622,581	-				+1.1
4,622,581	-				+1.1
4,622,581	-				-1.5
4,622,581	-				+2.1
4,622,605	-				-0.2
4,622,605	-				+1.1
4,622,685	+				-5.9
4,622,685	+				+1.1
4,622,685	+				+1.1
4,622,685	+				+0.1
4,622,685	+				+1.1
4,622,685	+				-5.5
4,622,685	+				+0.1
4,622,685	+				+0.1
4,622,685	+				+1.1
4,622,686	-				+1.1
4,622,686	-				+1.1
4,622,686	-				-0.3
4,622,686	-				+1.1
4,622,698	+				-0.5
4,622,698	+				-0.5
4,622,698	+				+0.1
4,622,698	+				-0.5
4,622,698	+				-2.8
4,622,698	+				+0.1
4,622,698	+				+1.1
4,622,699	-				-0.3
4,622,699	-				-0.5
4,622,699	-				-0.9
4,622,699	-				-1.9
4,622,700	+				-0.5
4,622,700	+				-0.3
4,622,700	+				+0.1
4,622,700	+				+1.1
4,622,718	+				+1.1
4,622,718	+				+1.1
4,622,737	+				+1.1
4,622,737	+				-0.9
4,622,737	+				-0.5
4,622,738	-				+1.1
4,622,850	+		Pf6N2E2_3973	0.27	+0.1
4,622,850	+		Pf6N2E2_3973	0.27	+1.1
4,622,850	+		Pf6N2E2_3973	0.27	-0.3
4,622,851	-		Pf6N2E2_3973	0.27	-0.5
4,622,851	-		Pf6N2E2_3973	0.27	+0.1
4,622,851	-		Pf6N2E2_3973	0.27	+1.1
4,622,853	+		Pf6N2E2_3973	0.28	+1.1
4,622,854	-		Pf6N2E2_3973	0.28	-0.5
4,622,889	-		Pf6N2E2_3973	0.37	+1.1