Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3951

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,590,977	+		Pf6N2E2_3950	0.28	-0.5
4,591,264	+		Pf6N2E2_3950	0.54	-0.5
4,591,265	-		Pf6N2E2_3950	0.55	+0.1
4,591,265	-		Pf6N2E2_3950	0.55	+0.8
4,591,265	-		Pf6N2E2_3950	0.55	+0.1
4,591,426	+		Pf6N2E2_3950	0.70	+1.1
4,591,426	+		Pf6N2E2_3950	0.70	+1.1
4,591,426	+		Pf6N2E2_3950	0.70	+0.1
4,591,427	-		Pf6N2E2_3950	0.70	+1.1
4,591,427	-		Pf6N2E2_3950	0.70	+1.1
4,591,427	-		Pf6N2E2_3950	0.70	-1.9
4,591,427	-		Pf6N2E2_3950	0.70	-0.5
4,591,427	-		Pf6N2E2_3950	0.70	-0.3
4,591,427	-		Pf6N2E2_3950	0.70	+0.1
4,591,427	-		Pf6N2E2_3950	0.70	+0.1
4,591,427	-		Pf6N2E2_3950	0.70	-0.5
4,591,427	-		Pf6N2E2_3950	0.70	+1.1
4,591,487	+		Pf6N2E2_3950	0.75	+1.1
4,591,605	-		Pf6N2E2_3950	0.86	+0.1
4,591,737	+				+1.1
4,591,737	+				-0.9
4,591,737	+				+1.1
4,591,802	+				-0.9
4,591,803	-				+1.1
4,591,814	+				+1.1
4,591,815	-				-0.2
4,591,891	-		Pf6N2E2_3951	0.13	+1.1
4,592,217	+		Pf6N2E2_3951	0.43	+1.5
4,592,217	+		Pf6N2E2_3951	0.43	+0.1
4,592,217	+		Pf6N2E2_3951	0.43	+1.7
4,592,217	+		Pf6N2E2_3951	0.43	+0.1
4,592,218	-		Pf6N2E2_3951	0.43	+0.1
4,592,349	+		Pf6N2E2_3951	0.55	+0.5
4,592,349	+		Pf6N2E2_3951	0.55	+1.1
4,592,349	+		Pf6N2E2_3951	0.55	+1.1
4,592,349	+		Pf6N2E2_3951	0.55	+1.1
4,592,350	-		Pf6N2E2_3951	0.55	+1.1
4,592,350	-		Pf6N2E2_3951	0.55	-0.1
4,592,439	+		Pf6N2E2_3951	0.63	+1.1
4,592,458	-		Pf6N2E2_3951	0.65	-1.7
4,592,801	+				+1.1
4,592,801	+				+1.1
4,592,802	-				+0.1
4,592,822	+				+0.1
4,592,823	-				-0.5
4,592,867	+				+1.1
4,592,876	-				+1.1
4,592,876	-				-0.9
4,592,876	-				+0.1
4,592,876	-				+1.1
4,592,876	-				+0.1
4,592,901	+				-0.5
4,592,901	+				+0.1
4,592,901	+				+1.1
4,592,901	+				-0.5
4,592,901	+				-0.5
4,592,902	-				+1.1
4,592,902	-				-0.9
4,592,902	-				+0.1
4,592,902	-				-0.5
4,592,902	-				-0.9
4,592,920	+				+1.1
4,592,921	-				-1.5
4,593,017	-				+0.1
4,593,017	-				+0.1
4,593,017	-				+0.1
4,593,038	+				+1.1
4,593,304	+		Pf6N2E2_3952	0.27	-0.3
4,593,305	-		Pf6N2E2_3952	0.27	+1.1
4,593,305	-		Pf6N2E2_3952	0.27	-0.9
4,593,580	+		Pf6N2E2_3952	0.51	-1.5
4,593,580	+		Pf6N2E2_3952	0.51	-0.3
4,593,580	+		Pf6N2E2_3952	0.51	-0.9
4,593,580	+		Pf6N2E2_3952	0.51	+0.1
4,593,581	-		Pf6N2E2_3952	0.51	-1.4
4,593,581	-		Pf6N2E2_3952	0.51	+0.1
4,593,581	-		Pf6N2E2_3952	0.51	+0.1
4,593,581	-		Pf6N2E2_3952	0.51	-1.2
4,593,581	-		Pf6N2E2_3952	0.51	-0.5