Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3933

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,568,926	+		Pf6N2E2_3932	0.56	-2.9
4,568,926	+		Pf6N2E2_3932	0.56	-2.8
4,568,927	-		Pf6N2E2_3932	0.56	+0.1
4,568,927	-		Pf6N2E2_3932	0.56	+1.1
4,569,149	-		Pf6N2E2_3932	0.74	-1.9
4,569,355	+				-2.1
4,569,355	+				-3.0
4,569,356	-				-0.5
4,569,356	-				+0.1
4,569,356	-				+0.1
4,569,356	-				+1.1
4,569,356	-				-6.4
4,569,356	-				-0.5
4,569,371	-				-0.5
4,569,371	-				+1.1
4,569,444	-				-1.5
4,569,520	-				-1.2
4,569,568	-				+1.1
4,569,583	+				+1.1
4,569,583	+				+0.1
4,569,588	+				+0.1
4,569,589	-				+0.1
4,569,589	-				+1.1
4,569,589	-				+1.1
4,569,589	-				+0.1
4,569,589	-				-2.2
4,569,593	+				-1.4
4,569,593	+				+1.1
4,569,593	+				-1.2
4,569,593	+				-0.2
4,569,593	+				+0.1
4,569,593	+				+0.1
4,569,593	+				-1.7
4,569,594	-				+0.1
4,569,594	-				+0.1
4,569,594	-				+0.6
4,569,594	-				-0.9
4,569,594	-				+1.1
4,569,594	-				+1.1
4,569,594	-				+1.1
4,569,690	+				-1.2
4,569,690	+				+1.1
4,569,690	+				+1.1
4,569,690	+				-0.5
4,569,691	-				-1.0
4,569,691	-				-0.5
4,569,691	-				-0.9
4,569,691	-				+0.1
4,569,691	-				+1.1
4,569,890	-		Pf6N2E2_3933	0.17	+0.1
4,569,947	+		Pf6N2E2_3933	0.21	+1.1
4,569,947	+		Pf6N2E2_3933	0.21	-0.5
4,569,947	+		Pf6N2E2_3933	0.21	-1.2
4,569,948	-		Pf6N2E2_3933	0.21	+0.1
4,569,948	-		Pf6N2E2_3933	0.21	-0.5
4,569,948	-		Pf6N2E2_3933	0.21	+0.1
4,569,948	-		Pf6N2E2_3933	0.21	+0.1
4,570,239	-		Pf6N2E2_3933	0.42	+0.1
4,570,239	-		Pf6N2E2_3933	0.42	-0.5
4,570,500	-		Pf6N2E2_3933	0.60	-0.9
4,570,500	-		Pf6N2E2_3933	0.60	+1.1
4,570,650	-		Pf6N2E2_3933	0.71	-1.9
4,570,650	-		Pf6N2E2_3933	0.71	+1.1
4,570,650	-		Pf6N2E2_3933	0.71	-0.5
4,570,682	+		Pf6N2E2_3933	0.73	-1.1
4,570,683	-		Pf6N2E2_3933	0.73	-0.5
4,570,907	+		Pf6N2E2_3933	0.89	+1.1
4,570,907	+		Pf6N2E2_3933	0.89	+0.1
4,570,907	+		Pf6N2E2_3933	0.89	-1.0
4,570,908	-		Pf6N2E2_3933	0.89	+0.1
4,570,908	-		Pf6N2E2_3933	0.89	+1.1
4,570,967	+				+0.1
4,570,967	+				+0.1
4,570,967	+				+1.1
4,570,967	+				-1.2
4,570,967	+				+1.1
4,570,967	+				+1.1
4,570,967	+				+1.1
4,570,967	+				-1.2
4,570,967	+				+0.1
4,570,967	+				-1.9
4,570,967	+				+0.1
4,570,968	-				+1.1
4,570,968	-				-0.5
4,570,968	-				-0.2
4,570,968	-				+1.1
4,570,968	-				+1.1
4,570,968	-				-0.5
4,570,968	-				-1.2
4,570,969	+				-0.9
4,570,994	+				-0.5
4,570,994	+				+0.1
4,570,994	+				-1.1
4,571,114	+				+0.5
4,571,115	-				+1.1
4,571,115	-				+0.1
4,571,115	-				+1.1
4,571,115	-				+1.1
4,571,126	+				+0.1
4,571,126	+				-1.3
4,571,126	+				+1.1
4,571,127	-				-1.2
4,571,127	-				-0.4
4,571,127	-				+0.3
4,571,143	+				+0.1
4,571,143	+				-0.3
4,571,143	+				+0.7
4,571,143	+				+1.1
4,571,143	+				-0.7
4,571,144	-				-0.5
4,571,187	-		Pf6N2E2_3934	0.12	-0.5
4,571,187	-		Pf6N2E2_3934	0.12	+1.1
4,571,315	+		Pf6N2E2_3934	0.31	+1.1
4,571,315	+		Pf6N2E2_3934	0.31	+0.1
4,571,316	-		Pf6N2E2_3934	0.31	-0.7
4,571,316	-		Pf6N2E2_3934	0.31	-0.5
4,571,379	+		Pf6N2E2_3934	0.41	+1.1
4,571,380	-		Pf6N2E2_3934	0.41	+0.5
4,571,380	-		Pf6N2E2_3934	0.41	-0.5
4,571,590	+		Pf6N2E2_3934	0.72	+0.1
4,571,591	-		Pf6N2E2_3934	0.73	+0.1
4,571,591	-		Pf6N2E2_3934	0.73	-0.5
4,571,593	+		Pf6N2E2_3934	0.73	+1.1
4,571,594	-		Pf6N2E2_3934	0.73	+1.1
4,571,594	-		Pf6N2E2_3934	0.73	+0.1
4,571,594	-		Pf6N2E2_3934	0.73	+0.1
4,571,594	-		Pf6N2E2_3934	0.73	+0.1
4,571,633	+		Pf6N2E2_3934	0.79	+1.1
4,571,633	+		Pf6N2E2_3934	0.79	+0.1
4,571,633	+		Pf6N2E2_3934	0.79	-0.3
4,571,633	+		Pf6N2E2_3934	0.79	+0.1
4,571,633	+		Pf6N2E2_3934	0.79	+1.1
4,571,634	-		Pf6N2E2_3934	0.79	-0.2
4,571,634	-		Pf6N2E2_3934	0.79	+1.1
4,571,634	-		Pf6N2E2_3934	0.79	+0.1
4,571,634	-		Pf6N2E2_3934	0.79	-0.4
4,571,634	-		Pf6N2E2_3934	0.79	+1.1
4,571,634	-		Pf6N2E2_3934	0.79	+0.1
4,571,634	-		Pf6N2E2_3934	0.79	+1.1
4,571,778	+				+1.1
4,571,910	+				+0.1
4,571,911	-				+0.5