Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3912

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,546,431	-				-0.5
4,546,485	+				-1.2
4,546,486	-				-1.5
4,546,486	-				-0.5
4,546,644	-		Pf6N2E2_3911	0.27	+1.1
4,546,797	-		Pf6N2E2_3911	0.45	+0.1
4,546,821	-		Pf6N2E2_3911	0.48	+1.1
4,546,880	+		Pf6N2E2_3911	0.55	-0.5
4,546,880	+		Pf6N2E2_3911	0.55	-0.5
4,546,880	+		Pf6N2E2_3911	0.55	-0.0
4,546,951	-		Pf6N2E2_3911	0.63	-0.5
4,547,524	-		Pf6N2E2_3912	0.25	-0.9
4,547,551	+		Pf6N2E2_3912	0.29	+0.1
4,547,551	+		Pf6N2E2_3912	0.29	+1.1
4,547,552	-		Pf6N2E2_3912	0.29	+0.1
4,547,552	-		Pf6N2E2_3912	0.29	+0.1
4,547,681	+		Pf6N2E2_3912	0.44	-0.5
4,547,681	+		Pf6N2E2_3912	0.44	+1.1
4,547,709	+		Pf6N2E2_3912	0.47	+0.1
4,548,163	+				+1.1
4,548,163	+				+1.1
4,548,163	+				+1.1
4,548,163	+				-0.9
4,548,163	+				+1.1
4,548,163	+				+1.1
4,548,163	+				+1.1
4,548,164	-				+1.1
4,548,164	-				-0.5
4,548,164	-				+1.1
4,548,164	-				-0.5
4,548,312	+				+0.1
4,548,313	-				+1.1
4,548,313	-				-0.4
4,548,554	+		Pf6N2E2_3913	0.23	-1.9
4,548,554	+		Pf6N2E2_3913	0.23	-0.5
4,548,554	+		Pf6N2E2_3913	0.23	+1.1
4,548,554	+		Pf6N2E2_3913	0.23	+0.1
4,548,555	-		Pf6N2E2_3913	0.24	-2.2
4,548,555	-		Pf6N2E2_3913	0.24	-0.2
4,548,555	-		Pf6N2E2_3913	0.24	-0.4
4,548,648	+		Pf6N2E2_3913	0.32	+0.3
4,548,648	+		Pf6N2E2_3913	0.32	+1.1
4,548,649	-		Pf6N2E2_3913	0.33	+1.1
4,548,649	-		Pf6N2E2_3913	0.33	+1.1
4,548,649	-		Pf6N2E2_3913	0.33	+1.4
4,548,649	-		Pf6N2E2_3913	0.33	-1.2
4,548,649	-		Pf6N2E2_3913	0.33	-0.5
4,548,649	-		Pf6N2E2_3913	0.33	+0.1
4,548,683	-		Pf6N2E2_3913	0.36	+0.5
4,548,759	+		Pf6N2E2_3913	0.43	-0.5
4,548,760	-		Pf6N2E2_3913	0.43	-0.4
4,548,855	+		Pf6N2E2_3913	0.52	-0.7
4,548,855	+		Pf6N2E2_3913	0.52	+0.1
4,548,855	+		Pf6N2E2_3913	0.52	+0.1
4,548,855	+		Pf6N2E2_3913	0.52	-0.5
4,548,855	+		Pf6N2E2_3913	0.52	-0.2
4,548,855	+		Pf6N2E2_3913	0.52	-0.3
4,548,855	+		Pf6N2E2_3913	0.52	-0.2
4,548,855	+		Pf6N2E2_3913	0.52	+0.1
4,548,856	-		Pf6N2E2_3913	0.53	-0.3
4,548,856	-		Pf6N2E2_3913	0.53	+0.1
4,548,856	-		Pf6N2E2_3913	0.53	+1.1
4,548,856	-		Pf6N2E2_3913	0.53	-0.5
4,548,856	-		Pf6N2E2_3913	0.53	+1.1
4,548,876	-		Pf6N2E2_3913	0.54	-0.5
4,548,939	+		Pf6N2E2_3913	0.61	+1.1
4,548,940	-		Pf6N2E2_3913	0.61	-0.0
4,549,002	+		Pf6N2E2_3913	0.67	-0.2
4,549,003	-		Pf6N2E2_3913	0.67	+1.1
4,549,140	+		Pf6N2E2_3913	0.80	-0.9
4,549,152	+		Pf6N2E2_3913	0.81	+0.1
4,549,152	+		Pf6N2E2_3913	0.81	-0.7
4,549,152	+		Pf6N2E2_3913	0.81	+0.2
4,549,152	+		Pf6N2E2_3913	0.81	+1.1