Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3793

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,418,841	+		Pf6N2E2_3792	0.72	+1.1
4,418,842	-		Pf6N2E2_3792	0.72	+1.1
4,418,985	+		Pf6N2E2_3792	0.81	+0.1
4,418,985	+		Pf6N2E2_3792	0.81	+0.1
4,418,985	+		Pf6N2E2_3792	0.81	+1.1
4,418,986	-		Pf6N2E2_3792	0.81	+1.1
4,418,986	-		Pf6N2E2_3792	0.81	+0.1
4,418,986	-		Pf6N2E2_3792	0.81	+0.1
4,419,060	+		Pf6N2E2_3792	0.85	+0.8
4,419,060	+		Pf6N2E2_3792	0.85	+0.1
4,419,224	+				+1.1
4,419,335	-				+0.1
4,419,397	-				+0.1
4,419,401	+				+0.3
4,419,401	+				+1.1
4,419,401	+				+1.1
4,419,402	-				-1.3
4,419,402	-				+1.1
4,419,402	-				+0.1
4,419,402	-				-0.1
4,419,520	+				+1.1
4,419,521	-				+0.0
4,419,521	-				-0.5
4,419,524	+				+1.1
4,419,524	+				+1.1
4,419,525	-				+0.1
4,419,525	-				-0.9
4,419,569	+				+0.7
4,419,569	+				+0.6
4,419,574	-				-0.5
4,419,574	-				+1.1
4,419,574	-				-0.7
4,419,576	+				+1.1
4,419,577	-				-0.5
4,419,610	+				+1.1
4,419,610	+				+0.6
4,419,610	+				+1.1
4,419,610	+				+1.1
4,419,611	-				+1.1
4,419,682	+				+0.2
4,419,742	-		Pf6N2E2_3793	0.16	-0.5
4,419,788	+		Pf6N2E2_3793	0.26	+0.1
4,419,788	+		Pf6N2E2_3793	0.26	+0.0
4,419,788	+		Pf6N2E2_3793	0.26	+0.4
4,419,789	-		Pf6N2E2_3793	0.26	+1.1
4,419,789	-		Pf6N2E2_3793	0.26	+0.3
4,419,789	-		Pf6N2E2_3793	0.26	-0.5
4,419,789	-		Pf6N2E2_3793	0.26	+0.1
4,419,956	+		Pf6N2E2_3793	0.65	-0.5
4,419,957	-		Pf6N2E2_3793	0.65	-2.0
4,419,960	+		Pf6N2E2_3793	0.66	+0.3
4,419,960	+		Pf6N2E2_3793	0.66	+1.2
4,419,961	-		Pf6N2E2_3793	0.66	+1.1
4,419,961	-		Pf6N2E2_3793	0.66	+0.1
4,419,969	+		Pf6N2E2_3793	0.68	+0.1
4,419,969	+		Pf6N2E2_3793	0.68	+0.9
4,419,969	+		Pf6N2E2_3793	0.68	+1.1
4,419,970	-		Pf6N2E2_3793	0.68	-0.5
4,419,970	-		Pf6N2E2_3793	0.68	+0.1
4,420,066	+		Pf6N2E2_3793	0.90	+0.4
4,420,067	-				-1.2
4,420,381	+		Pf6N2E2_3794	0.28	+0.1
4,420,381	+		Pf6N2E2_3794	0.28	-0.5
4,420,381	+		Pf6N2E2_3794	0.28	+0.4
4,420,382	-		Pf6N2E2_3794	0.28	+1.1
4,420,382	-		Pf6N2E2_3794	0.28	-0.1
4,420,382	-		Pf6N2E2_3794	0.28	+0.1
4,420,469	+		Pf6N2E2_3794	0.37	-0.5
4,420,469	+		Pf6N2E2_3794	0.37	+0.0
4,420,594	+		Pf6N2E2_3794	0.50	+0.1
4,420,594	+		Pf6N2E2_3794	0.50	+1.1
4,420,595	-		Pf6N2E2_3794	0.50	+1.1
4,420,595	-		Pf6N2E2_3794	0.50	+1.1
4,420,639	+		Pf6N2E2_3794	0.55	+1.1
4,420,639	+		Pf6N2E2_3794	0.55	-0.2
4,420,639	+		Pf6N2E2_3794	0.55	+1.1
4,420,640	-		Pf6N2E2_3794	0.55	-1.6
4,420,724	-		Pf6N2E2_3794	0.63	+1.1
4,420,915	+		Pf6N2E2_3794	0.83	-0.9
4,420,915	+		Pf6N2E2_3794	0.83	+1.1
4,420,915	+		Pf6N2E2_3794	0.83	+1.1
4,421,005	+				-0.9
4,421,006	-				+0.1
4,421,006	-				+1.1