Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3730

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,342,529	+		Pf6N2E2_3729	0.33	+1.1
4,342,649	+		Pf6N2E2_3729	0.43	+0.1
4,342,650	-		Pf6N2E2_3729	0.43	+0.1
4,342,742	+		Pf6N2E2_3729	0.50	+0.1
4,343,016	-		Pf6N2E2_3729	0.72	-0.9
4,343,016	-		Pf6N2E2_3729	0.72	+0.1
4,343,016	-		Pf6N2E2_3729	0.72	+0.1
4,343,195	+		Pf6N2E2_3729	0.87	-0.5
4,343,196	-		Pf6N2E2_3729	0.87	-0.4
4,343,249	+				+1.1
4,343,250	-				-0.7
4,343,285	+				+0.3
4,343,286	-				+1.1
4,343,549	+		Pf6N2E2_3730	0.34	+0.1
4,343,549	+		Pf6N2E2_3730	0.34	+0.2
4,343,550	-		Pf6N2E2_3730	0.34	+1.4
4,343,563	+		Pf6N2E2_3730	0.37	+0.1
4,343,741	+		Pf6N2E2_3730	0.77	+1.1
4,343,742	-		Pf6N2E2_3730	0.77	+0.1
4,343,742	-		Pf6N2E2_3730	0.77	-0.2
4,343,742	-		Pf6N2E2_3730	0.77	+1.1
4,343,774	+		Pf6N2E2_3730	0.85	+0.1
4,343,774	+		Pf6N2E2_3730	0.85	+0.1
4,343,774	+		Pf6N2E2_3730	0.85	+1.1
4,343,774	+		Pf6N2E2_3730	0.85	+1.1
4,343,775	-		Pf6N2E2_3730	0.85	-0.5
4,343,775	-		Pf6N2E2_3730	0.85	+1.1
4,343,775	-		Pf6N2E2_3730	0.85	-1.2
4,343,775	-		Pf6N2E2_3730	0.85	+0.1
4,343,775	-		Pf6N2E2_3730	0.85	+1.1
4,343,775	-		Pf6N2E2_3730	0.85	+0.1
4,343,775	-		Pf6N2E2_3730	0.85	+1.1
4,343,775	-		Pf6N2E2_3730	0.85	+0.1
4,343,775	-		Pf6N2E2_3730	0.85	+1.1
4,343,840	+				+1.1
4,343,841	-				-0.7
4,343,906	+				-1.1
4,343,906	+				+1.1
4,343,906	+				+0.1
4,343,906	+				-0.5
4,343,907	-				+0.4
4,343,907	-				-1.2
4,343,907	-				-0.5
4,343,907	-				-0.5
4,343,907	-				+1.1
4,343,907	-				+1.1
4,343,907	-				+0.1
4,343,907	-				-1.2
4,343,913	+				+1.1
4,343,913	+				+0.1
4,343,913	+				+1.1
4,343,914	-				+1.1
4,343,914	-				+0.1
4,343,914	-				+1.1
4,343,955	+				+1.1
4,343,955	+				+0.1
4,343,956	-				+1.1
4,343,956	-				+0.1
4,343,956	-				+0.1
4,343,956	-				-0.7
4,343,956	-				+0.1
4,343,956	-				+1.1
4,343,956	-				+1.1
4,343,956	-				+1.1
4,343,956	-				+0.7
4,344,046	+		Pf6N2E2_3731	0.25	+1.1
4,344,047	-		Pf6N2E2_3731	0.25	+0.4
4,344,151	-		Pf6N2E2_3731	0.45	+1.1
4,344,151	-		Pf6N2E2_3731	0.45	+0.1
4,344,151	-		Pf6N2E2_3731	0.45	+0.1
4,344,182	+		Pf6N2E2_3731	0.51	+1.1
4,344,248	-		Pf6N2E2_3731	0.63	+0.1
4,344,280	-		Pf6N2E2_3731	0.69	+0.1
4,344,328	+		Pf6N2E2_3731	0.79	-1.2
4,344,328	+		Pf6N2E2_3731	0.79	-0.6
4,344,329	-		Pf6N2E2_3731	0.79	+1.1
4,344,378	+		Pf6N2E2_3731	0.88	+0.1
4,344,378	+		Pf6N2E2_3731	0.88	+1.1
4,344,378	+		Pf6N2E2_3731	0.88	-0.2
4,344,402	+				-0.9
4,344,435	+				+0.1
4,344,436	-				+0.1
4,344,535	+				+0.1
4,344,535	+				+0.1
4,344,535	+				+1.1
4,344,592	+				-0.5
4,344,789	+				-0.9
4,344,826	-				-0.9
4,344,841	+				+0.1
4,344,841	+				+1.1
4,344,841	+				-0.6
4,344,842	-				-1.5