Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3677

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,283,185	+		Pf6N2E2_3676	0.45	+0.1
4,283,186	-		Pf6N2E2_3676	0.45	-1.5
4,283,189	+		Pf6N2E2_3676	0.45	+0.1
4,283,189	+		Pf6N2E2_3676	0.45	+0.2
4,283,189	+		Pf6N2E2_3676	0.45	+0.1
4,283,189	+		Pf6N2E2_3676	0.45	+1.1
4,283,189	+		Pf6N2E2_3676	0.45	+1.1
4,283,189	+		Pf6N2E2_3676	0.45	+1.1
4,283,189	+		Pf6N2E2_3676	0.45	+0.7
4,283,189	+		Pf6N2E2_3676	0.45	+1.1
4,283,189	+		Pf6N2E2_3676	0.45	+1.1
4,283,190	-		Pf6N2E2_3676	0.45	+1.1
4,283,190	-		Pf6N2E2_3676	0.45	-0.5
4,283,190	-		Pf6N2E2_3676	0.45	+0.1
4,283,190	-		Pf6N2E2_3676	0.45	+0.1
4,283,190	-		Pf6N2E2_3676	0.45	-0.9
4,283,190	-		Pf6N2E2_3676	0.45	+0.1
4,283,190	-		Pf6N2E2_3676	0.45	-0.9
4,283,190	-		Pf6N2E2_3676	0.45	-0.4
4,283,261	+		Pf6N2E2_3676	0.50	+1.1
4,283,291	+		Pf6N2E2_3676	0.52	-0.2
4,283,340	+		Pf6N2E2_3676	0.56	-0.9
4,283,340	+		Pf6N2E2_3676	0.56	+1.1
4,283,341	-		Pf6N2E2_3676	0.56	-0.4
4,283,341	-		Pf6N2E2_3676	0.56	-0.5
4,283,366	+		Pf6N2E2_3676	0.58	-1.5
4,283,367	-		Pf6N2E2_3676	0.58	+0.3
4,283,367	-		Pf6N2E2_3676	0.58	+0.1
4,283,367	-		Pf6N2E2_3676	0.58	-0.4
4,283,367	-		Pf6N2E2_3676	0.58	+0.1
4,283,613	+		Pf6N2E2_3676	0.75	-0.5
4,283,614	-		Pf6N2E2_3676	0.75	-0.9
4,283,738	+		Pf6N2E2_3676	0.84	+0.1
4,283,738	+		Pf6N2E2_3676	0.84	+1.1
4,283,739	-		Pf6N2E2_3676	0.84	+0.3
4,283,739	-		Pf6N2E2_3676	0.84	+1.5
4,283,739	-		Pf6N2E2_3676	0.84	+0.1
4,283,739	-		Pf6N2E2_3676	0.84	+0.5
4,283,746	+		Pf6N2E2_3676	0.85	+0.1
4,283,747	-		Pf6N2E2_3676	0.85	+0.1
4,283,747	-		Pf6N2E2_3676	0.85	+0.2
4,283,819	+				-0.7
4,283,867	+				-0.7
4,283,868	-				+0.1
4,284,019	+				-0.9
4,284,020	-				+1.1
4,284,021	+				+0.1
4,284,085	+				+0.1
4,284,086	-				-0.9
4,284,086	-				+0.5
4,284,089	-				+0.1
4,284,194	+				+1.1
4,284,195	-				+1.1
4,284,217	-				+1.1
4,284,286	+				+0.1
4,284,306	-				+0.1
4,284,364	+				+0.1
4,284,412	+		Pf6N2E2_3677	0.10	+0.1
4,284,412	+		Pf6N2E2_3677	0.10	+0.3
4,284,412	+		Pf6N2E2_3677	0.10	+0.3
4,284,478	+		Pf6N2E2_3677	0.13	+1.1
4,284,479	-		Pf6N2E2_3677	0.13	+1.1
4,284,479	-		Pf6N2E2_3677	0.13	-0.5
4,284,479	-		Pf6N2E2_3677	0.13	+1.1
4,284,479	-		Pf6N2E2_3677	0.13	-1.5
4,284,479	-		Pf6N2E2_3677	0.13	+1.1
4,284,479	-		Pf6N2E2_3677	0.13	+1.1
4,284,479	-		Pf6N2E2_3677	0.13	+0.1
4,284,479	-		Pf6N2E2_3677	0.13	-0.5
4,284,479	-		Pf6N2E2_3677	0.13	-0.5
4,284,479	-		Pf6N2E2_3677	0.13	+1.1
4,284,479	-		Pf6N2E2_3677	0.13	+0.1
4,284,481	-		Pf6N2E2_3677	0.13	+1.1
4,284,481	-		Pf6N2E2_3677	0.13	+0.1
4,284,536	+		Pf6N2E2_3677	0.15	+0.1
4,284,537	-		Pf6N2E2_3677	0.15	+1.1
4,284,698	-		Pf6N2E2_3677	0.21	+1.1
4,284,698	-		Pf6N2E2_3677	0.21	+1.1
4,284,760	+		Pf6N2E2_3677	0.23	+0.1
4,284,760	+		Pf6N2E2_3677	0.23	+0.1
4,284,761	-		Pf6N2E2_3677	0.23	+0.4
4,284,761	-		Pf6N2E2_3677	0.23	-1.2
4,284,761	-		Pf6N2E2_3677	0.23	-0.5
4,284,761	-		Pf6N2E2_3677	0.23	-0.5
4,284,761	-		Pf6N2E2_3677	0.23	+0.2
4,284,761	-		Pf6N2E2_3677	0.23	+1.1
4,284,823	+		Pf6N2E2_3677	0.25	-1.5
4,284,844	+		Pf6N2E2_3677	0.26	+1.1
4,284,844	+		Pf6N2E2_3677	0.26	+0.1
4,284,844	+		Pf6N2E2_3677	0.26	+1.1
4,284,845	-		Pf6N2E2_3677	0.26	+0.7
4,284,886	+		Pf6N2E2_3677	0.28	+0.1
4,284,887	-		Pf6N2E2_3677	0.28	+0.1
4,285,055	+		Pf6N2E2_3677	0.34	+1.1
4,285,056	-		Pf6N2E2_3677	0.34	+1.1
4,285,056	-		Pf6N2E2_3677	0.34	+0.4
4,285,056	-		Pf6N2E2_3677	0.34	+1.1
4,285,240	+		Pf6N2E2_3677	0.41	+1.3
4,285,240	+		Pf6N2E2_3677	0.41	-0.5
4,285,241	-		Pf6N2E2_3677	0.41	-0.3
4,285,273	+		Pf6N2E2_3677	0.42	-0.9
4,285,274	-		Pf6N2E2_3677	0.42	+1.1
4,285,274	-		Pf6N2E2_3677	0.42	+1.1
4,285,454	-		Pf6N2E2_3677	0.49	+0.1
4,285,480	+		Pf6N2E2_3677	0.50	+1.1
4,285,481	-		Pf6N2E2_3677	0.50	-0.7
4,285,481	-		Pf6N2E2_3677	0.50	+1.1
4,285,481	-		Pf6N2E2_3677	0.50	+0.1
4,285,492	+		Pf6N2E2_3677	0.50	+0.6
4,285,493	-		Pf6N2E2_3677	0.50	+1.1
4,285,493	-		Pf6N2E2_3677	0.50	-0.5
4,285,493	-		Pf6N2E2_3677	0.50	+1.1
4,285,493	-		Pf6N2E2_3677	0.50	+0.6
4,285,493	-		Pf6N2E2_3677	0.50	-1.1
4,285,546	+		Pf6N2E2_3677	0.52	-0.8
4,286,047	+		Pf6N2E2_3677	0.71	+1.1
4,286,047	+		Pf6N2E2_3677	0.71	+1.1
4,286,047	+		Pf6N2E2_3677	0.71	-0.1
4,286,047	+		Pf6N2E2_3677	0.71	+0.1
4,286,048	-		Pf6N2E2_3677	0.71	+0.1
4,286,048	-		Pf6N2E2_3677	0.71	-0.5
4,286,110	+		Pf6N2E2_3677	0.73	+1.1
4,286,110	+		Pf6N2E2_3677	0.73	+1.1
4,286,111	-		Pf6N2E2_3677	0.73	+0.1
4,286,111	-		Pf6N2E2_3677	0.73	-0.0
4,286,111	-		Pf6N2E2_3677	0.73	+0.5
4,286,536	+		Pf6N2E2_3677	0.89	+1.1
4,286,552	-		Pf6N2E2_3677	0.90	+2.7
4,286,552	-		Pf6N2E2_3677	0.90	-0.5
4,286,841	+				-0.6
4,286,841	+				+1.1
4,286,841	+				-0.2
4,286,843	+				-0.5
4,286,843	+				-0.4
4,286,843	+				+0.1
4,286,844	-				+0.1
4,286,881	-				-1.9
4,286,881	-				+1.1
4,286,881	-				+0.4
4,287,181	+		Pf6N2E2_3678	0.41	-0.5
4,287,181	+		Pf6N2E2_3678	0.41	+0.1
4,287,182	-		Pf6N2E2_3678	0.41	+0.3
4,287,182	-		Pf6N2E2_3678	0.41	+0.6
4,287,235	+		Pf6N2E2_3678	0.49	+1.1
4,287,235	+		Pf6N2E2_3678	0.49	-0.5
4,287,257	-		Pf6N2E2_3678	0.52	+0.1
4,287,257	-		Pf6N2E2_3678	0.52	+1.1
4,287,352	+		Pf6N2E2_3678	0.67	+1.1
4,287,352	+		Pf6N2E2_3678	0.67	-1.4
4,287,352	+		Pf6N2E2_3678	0.67	+0.1
4,287,352	+		Pf6N2E2_3678	0.67	+1.1
4,287,352	+		Pf6N2E2_3678	0.67	+0.1
4,287,352	+		Pf6N2E2_3678	0.67	+0.1
4,287,353	-		Pf6N2E2_3678	0.67	+0.4
4,287,353	-		Pf6N2E2_3678	0.67	-0.5
4,287,353	-		Pf6N2E2_3678	0.67	-0.5
4,287,353	-		Pf6N2E2_3678	0.67	+1.1
4,287,472	+		Pf6N2E2_3678	0.86	+1.1
4,287,472	+		Pf6N2E2_3678	0.86	+0.1
4,287,473	-		Pf6N2E2_3678	0.86	+0.1
4,287,487	+		Pf6N2E2_3678	0.88	+1.1
4,287,488	-		Pf6N2E2_3678	0.88	+0.1
4,287,499	+		Pf6N2E2_3678	0.90	+0.3
4,287,523	+				+0.3
4,287,523	+				+0.1
4,287,523	+				+1.1
4,287,524	-				+1.1
4,287,635	+				-0.5
4,287,635	+				+1.1
4,287,641	+				+0.1
4,287,641	+				+1.1
4,287,641	+				-0.9
4,287,642	-				+1.1
4,287,642	-				+0.1