Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3526

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,110,753	-		Pf6N2E2_3524	0.87	-1.2
4,110,753	-		Pf6N2E2_3524	0.87	-0.1
4,110,796	+				-0.3
4,110,796	+				-0.5
4,110,857	+				+1.1
4,110,868	+				+0.3
4,110,907	+				+1.1
4,110,907	+				+0.5
4,110,907	+				+0.5
4,110,953	+				+1.0
4,110,954	-				+0.5
4,110,972	-				-1.2
4,110,983	+				+2.0
4,111,054	-				+1.0
4,111,117	-				+1.0
4,111,137	+				+1.0
4,111,137	+				-0.5
4,111,137	+				-0.3
4,111,137	+				+1.0
4,111,137	+				-1.1
4,111,137	+				+0.0
4,111,138	-				+0.0
4,111,257	+		Pf6N2E2_3525	0.28	-0.5
4,111,257	+		Pf6N2E2_3525	0.28	+0.0
4,111,258	-		Pf6N2E2_3525	0.28	+0.0
4,111,258	-		Pf6N2E2_3525	0.28	-0.7
4,111,375	+		Pf6N2E2_3525	0.47	+1.0
4,111,423	+		Pf6N2E2_3525	0.55	+1.0
4,111,423	+		Pf6N2E2_3525	0.55	+0.2
4,111,424	-		Pf6N2E2_3525	0.56	-0.5
4,111,424	-		Pf6N2E2_3525	0.56	+0.0
4,111,554	+		Pf6N2E2_3525	0.77	+0.0
4,111,554	+		Pf6N2E2_3525	0.77	+1.0
4,111,554	+		Pf6N2E2_3525	0.77	-0.1
4,111,554	+		Pf6N2E2_3525	0.77	-0.7
4,111,555	-		Pf6N2E2_3525	0.78	+1.0
4,111,555	-		Pf6N2E2_3525	0.78	-0.5
4,111,555	-		Pf6N2E2_3525	0.78	-0.8
4,111,555	-		Pf6N2E2_3525	0.78	+1.0
4,111,674	+				-0.5
4,111,675	-				+1.0
4,111,687	-				-0.2
4,111,761	+				+0.0
4,111,761	+				+1.0
4,111,762	-				+0.0
4,111,762	-				+0.0
4,111,771	+				+1.0
4,111,833	-		Pf6N2E2_3526	0.17	-1.3
4,111,899	-		Pf6N2E2_3526	0.25	+0.0
4,112,183	-		Pf6N2E2_3526	0.58	+1.0
4,112,240	-		Pf6N2E2_3526	0.65	-0.5
4,112,253	-		Pf6N2E2_3526	0.67	+1.0
4,112,325	-		Pf6N2E2_3526	0.75	+0.0
4,112,325	-		Pf6N2E2_3526	0.75	+1.0
4,112,430	+		Pf6N2E2_3526	0.88	+1.0
4,112,430	+		Pf6N2E2_3526	0.88	+1.5
4,112,430	+		Pf6N2E2_3526	0.88	+1.0
4,112,431	-		Pf6N2E2_3526	0.88	+1.0
4,112,431	-		Pf6N2E2_3526	0.88	+1.0
4,112,460	-				+1.0
4,112,471	+				-0.5
4,112,471	+				+1.0
4,112,471	+				+0.0
4,112,472	-				+0.0
4,112,548	-				+1.0
4,112,549	+				+1.0
4,112,551	+				-0.5
4,112,552	-				+0.0
4,112,552	-				+1.0
4,112,678	+				+0.0
4,112,801	-				-1.0
4,112,891	-		Pf6N2E2_3527	0.22	+0.0
4,112,891	-		Pf6N2E2_3527	0.22	+1.0
4,112,891	-		Pf6N2E2_3527	0.22	+1.0
4,112,891	-		Pf6N2E2_3527	0.22	+1.0
4,112,891	-		Pf6N2E2_3527	0.22	-0.7
4,112,894	+		Pf6N2E2_3527	0.22	-1.5
4,112,895	-		Pf6N2E2_3527	0.22	+1.0
4,112,920	+		Pf6N2E2_3527	0.26	+0.0
4,112,920	+		Pf6N2E2_3527	0.26	-0.7
4,112,921	-		Pf6N2E2_3527	0.26	-0.1
4,112,921	-		Pf6N2E2_3527	0.26	+1.0
4,112,921	-		Pf6N2E2_3527	0.26	+1.0
4,112,956	+		Pf6N2E2_3527	0.32	+1.0
4,112,957	-		Pf6N2E2_3527	0.32	-1.3
4,113,225	-		Pf6N2E2_3527	0.73	+1.0
4,113,337	-				+1.0
4,113,376	-				+1.0
4,113,408	+				+0.0
4,113,408	+				+1.0
4,113,409	-				-0.8
4,113,409	-				+1.0
4,113,497	+				-0.9
4,113,501	+				+1.1
4,113,502	-				-0.3
4,113,502	-				+1.1