Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3240

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,743,834	+		Pf6N2E2_3239	0.55	-0.5
3,743,834	+		Pf6N2E2_3239	0.55	+0.1
3,743,834	+		Pf6N2E2_3239	0.55	+0.1
3,743,834	+		Pf6N2E2_3239	0.55	-0.9
3,743,835	-		Pf6N2E2_3239	0.55	+0.1
3,743,990	+		Pf6N2E2_3239	0.63	+1.1
3,743,990	+		Pf6N2E2_3239	0.63	+1.1
3,743,990	+		Pf6N2E2_3239	0.63	+1.1
3,743,990	+		Pf6N2E2_3239	0.63	+1.1
3,743,991	-		Pf6N2E2_3239	0.63	-0.5
3,743,991	-		Pf6N2E2_3239	0.63	+1.1
3,743,994	+		Pf6N2E2_3239	0.63	+0.1
3,743,995	-		Pf6N2E2_3239	0.63	+0.1
3,743,995	-		Pf6N2E2_3239	0.63	+1.1
3,743,995	-		Pf6N2E2_3239	0.63	-0.4
3,744,298	+		Pf6N2E2_3239	0.79	-2.2
3,744,298	+		Pf6N2E2_3239	0.79	+0.1
3,744,299	-		Pf6N2E2_3239	0.79	+0.1
3,744,308	-		Pf6N2E2_3239	0.80	-0.2
3,744,311	+		Pf6N2E2_3239	0.80	+1.1
3,744,312	-		Pf6N2E2_3239	0.80	+1.1
3,744,349	-		Pf6N2E2_3239	0.82	+1.1
3,744,350	+		Pf6N2E2_3239	0.82	+1.1
3,744,350	+		Pf6N2E2_3239	0.82	+1.1
3,744,351	-		Pf6N2E2_3239	0.82	-0.5
3,744,473	+		Pf6N2E2_3239	0.88	+1.1
3,744,474	-		Pf6N2E2_3239	0.88	-0.5
3,744,629	+				+1.1
3,744,629	+				-0.9
3,744,630	-				-0.4
3,744,630	-				+1.1
3,744,717	+				-0.5
3,744,717	+				+0.1
3,744,717	+				-0.5
3,744,717	+				+0.1
3,744,718	-				+0.1
3,744,718	-				+1.1
3,745,089	+		Pf6N2E2_3240	0.64	-1.9
3,745,257	+				+0.1
3,745,365	-				-0.5
3,745,435	-				-0.2
3,745,435	-				+1.1
3,745,516	+				+1.1
3,745,517	-				-0.8
3,745,708	+		Pf6N2E2_3241	0.10	+0.1
3,745,709	-		Pf6N2E2_3241	0.10	+1.2
3,746,058	+		Pf6N2E2_3241	0.24	+0.1
3,746,058	+		Pf6N2E2_3241	0.24	+1.1
3,746,059	-		Pf6N2E2_3241	0.24	-1.1
3,746,059	-		Pf6N2E2_3241	0.24	-0.5
3,746,059	-		Pf6N2E2_3241	0.24	+0.1
3,746,059	-		Pf6N2E2_3241	0.24	+0.1
3,746,154	+		Pf6N2E2_3241	0.27	+1.1
3,746,154	+		Pf6N2E2_3241	0.27	+0.1
3,746,154	+		Pf6N2E2_3241	0.27	+1.1
3,746,155	-		Pf6N2E2_3241	0.28	+0.1
3,746,155	-		Pf6N2E2_3241	0.28	+1.1
3,746,158	-		Pf6N2E2_3241	0.28	+1.1
3,746,158	-		Pf6N2E2_3241	0.28	-0.5
3,746,158	-		Pf6N2E2_3241	0.28	-0.5
3,746,239	-		Pf6N2E2_3241	0.31	+0.1
3,746,239	-		Pf6N2E2_3241	0.31	+0.3