Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2986

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,479,500	-		Pf6N2E2_2984	0.48	+1.0
3,479,904	-		Pf6N2E2_2984	0.89	+1.0
3,479,914	-				+1.0
3,480,064	+		Pf6N2E2_2985	0.13	-0.5
3,480,064	+		Pf6N2E2_2985	0.13	-0.0
3,480,065	-		Pf6N2E2_2985	0.13	+2.6
3,480,065	-		Pf6N2E2_2985	0.13	-0.0
3,480,065	-		Pf6N2E2_2985	0.13	-0.0
3,480,065	-		Pf6N2E2_2985	0.13	+1.0
3,480,366	+				-0.0
3,480,366	+				+1.0
3,480,367	-				+1.0
3,480,378	+				+1.0
3,480,378	+				+1.0
3,480,378	+				-0.0
3,480,378	+				+1.0
3,480,378	+				-0.6
3,480,378	+				-0.6
3,480,378	+				-0.6
3,480,378	+				+1.0
3,480,378	+				+1.2
3,480,378	+				+0.2
3,480,379	-				-0.6
3,480,379	-				-0.0
3,480,379	-				+1.0
3,480,379	-				-0.6
3,480,379	-				+1.0
3,480,379	-				-0.1
3,480,379	-				-0.6
3,480,379	-				-1.0
3,480,379	-				+1.0
3,480,414	+				+1.0
3,480,415	-				+1.0
3,480,452	+				-0.0
3,480,452	+				+1.0
3,480,452	+				-0.0
3,480,452	+				+0.4
3,480,452	+				-0.6
3,480,452	+				-0.0
3,480,453	-				+1.0
3,480,453	-				-0.0
3,480,453	-				+1.0
3,480,602	-		Pf6N2E2_2986	0.23	+1.0
3,480,787	+		Pf6N2E2_2986	0.51	-0.0
3,480,787	+		Pf6N2E2_2986	0.51	-0.0
3,480,876	-		Pf6N2E2_2986	0.65	-1.0
3,480,912	-		Pf6N2E2_2986	0.70	-0.8
3,480,912	-		Pf6N2E2_2986	0.70	-0.0
3,481,094	+				+1.0
3,481,095	-				+1.0
3,481,095	-				-0.0
3,481,095	-				+1.0
3,481,095	-				-0.0
3,481,125	+				+1.0
3,481,125	+				+1.0
3,481,310	-				+1.0
3,481,310	-				+1.0
3,481,310	-				-0.0
3,481,310	-				+0.7
3,481,320	-				-0.0
3,481,320	-				+1.0
3,481,330	+				-1.6
3,481,331	-				-0.0
3,481,418	+		Pf6N2E2_2987	0.13	-0.5
3,481,419	-		Pf6N2E2_2987	0.13	-0.6
3,481,419	-		Pf6N2E2_2987	0.13	+1.0
3,481,419	-		Pf6N2E2_2987	0.13	+1.0
3,481,442	+		Pf6N2E2_2987	0.17	+1.0
3,481,443	-		Pf6N2E2_2987	0.17	-0.0
3,481,443	-		Pf6N2E2_2987	0.17	+1.0
3,481,601	+		Pf6N2E2_2987	0.38	-1.2
3,481,601	+		Pf6N2E2_2987	0.38	+1.0
3,481,602	-		Pf6N2E2_2987	0.38	+2.0
3,481,611	+		Pf6N2E2_2987	0.39	+1.0
3,481,718	+		Pf6N2E2_2987	0.53	-0.1
3,481,719	-		Pf6N2E2_2987	0.53	+1.0
3,481,719	-		Pf6N2E2_2987	0.53	+0.7
3,481,739	+		Pf6N2E2_2987	0.56	+1.0
3,481,739	+		Pf6N2E2_2987	0.56	-0.4
3,481,739	+		Pf6N2E2_2987	0.56	+1.0
3,481,740	-		Pf6N2E2_2987	0.56	-1.5
3,481,740	-		Pf6N2E2_2987	0.56	+1.0