Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2917

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,409,712	-		Pf6N2E2_2916	0.60	+1.0
3,409,908	-		Pf6N2E2_2916	0.74	-1.0
3,410,078	+		Pf6N2E2_2916	0.87	-0.0
3,410,078	+		Pf6N2E2_2916	0.87	-0.0
3,410,272	-				+1.0
3,410,272	-				-0.0
3,410,304	+				+1.0
3,410,304	+				+1.0
3,410,304	+				+1.0
3,410,304	+				-0.0
3,410,305	-				+1.0
3,410,305	-				+1.0
3,410,391	+				-0.6
3,410,392	-				+1.0
3,410,429	+				-0.0
3,410,430	-				+1.0
3,410,460	+				-1.0
3,410,460	+				+1.0
3,410,461	-				+1.0
3,410,495	+				-0.0
3,410,498	-				+1.0
3,410,598	+				-0.6
3,410,599	-				+1.0
3,410,723	+				+1.0
3,410,724	-				-0.0
3,410,724	-				-0.0
3,410,724	-				-0.0
3,410,724	-				-0.2
3,410,724	-				-0.0
3,410,730	-				-0.6
3,410,730	-				+1.0
3,410,730	-				-1.6
3,410,730	-				-0.6
3,410,730	-				+1.0
3,410,730	-				-0.6
3,410,815	-				+1.0
3,410,815	-				+1.0
3,410,815	-				-0.5
3,410,918	+		Pf6N2E2_2917	0.14	+1.0
3,410,918	+		Pf6N2E2_2917	0.14	-0.0
3,410,919	-		Pf6N2E2_2917	0.14	-0.0
3,410,937	-		Pf6N2E2_2917	0.15	-0.7
3,410,937	-		Pf6N2E2_2917	0.15	-2.2
3,411,152	+		Pf6N2E2_2917	0.25	+1.0
3,411,153	-		Pf6N2E2_2917	0.25	-0.3
3,411,153	-		Pf6N2E2_2917	0.25	+1.0
3,411,158	-		Pf6N2E2_2917	0.25	-0.0
3,411,158	-		Pf6N2E2_2917	0.25	-0.6
3,411,227	+		Pf6N2E2_2917	0.28	-0.4
3,411,228	-		Pf6N2E2_2917	0.28	+1.0
3,411,299	+		Pf6N2E2_2917	0.32	+1.0
3,411,300	-		Pf6N2E2_2917	0.32	-0.6
3,411,300	-		Pf6N2E2_2917	0.32	+1.0
3,411,344	+		Pf6N2E2_2917	0.34	+1.0
3,411,422	+		Pf6N2E2_2917	0.37	-0.0
3,411,422	+		Pf6N2E2_2917	0.37	+1.0
3,411,422	+		Pf6N2E2_2917	0.37	-1.3
3,411,422	+		Pf6N2E2_2917	0.37	+1.0
3,411,423	-		Pf6N2E2_2917	0.37	-0.0
3,411,523	-		Pf6N2E2_2917	0.42	+1.0
3,411,523	-		Pf6N2E2_2917	0.42	+1.0
3,411,599	+		Pf6N2E2_2917	0.45	+1.0
3,411,600	-		Pf6N2E2_2917	0.46	+1.0
3,411,626	+		Pf6N2E2_2917	0.47	-0.6
3,411,627	-		Pf6N2E2_2917	0.47	+1.0
3,411,722	+		Pf6N2E2_2917	0.51	-0.4
3,411,794	+		Pf6N2E2_2917	0.54	+2.0
3,411,794	+		Pf6N2E2_2917	0.54	-0.0
3,411,795	-		Pf6N2E2_2917	0.54	-0.6
3,411,795	-		Pf6N2E2_2917	0.54	-0.6
3,411,795	-		Pf6N2E2_2917	0.54	+1.0
3,411,795	-		Pf6N2E2_2917	0.54	-0.2
3,411,795	-		Pf6N2E2_2917	0.54	+1.0
3,411,795	-		Pf6N2E2_2917	0.54	-0.6
3,411,848	+		Pf6N2E2_2917	0.57	-1.0
3,411,861	-		Pf6N2E2_2917	0.57	+1.0
3,412,157	+		Pf6N2E2_2917	0.71	-1.7
3,412,157	+		Pf6N2E2_2917	0.71	+1.0
3,412,158	-		Pf6N2E2_2917	0.71	-0.6
3,412,158	-		Pf6N2E2_2917	0.71	-1.3
3,412,158	-		Pf6N2E2_2917	0.71	-0.0
3,412,158	-		Pf6N2E2_2917	0.71	+1.0
3,412,158	-		Pf6N2E2_2917	0.71	-0.0
3,412,253	+		Pf6N2E2_2917	0.75	+1.0
3,412,254	-		Pf6N2E2_2917	0.76	-0.0
3,412,254	-		Pf6N2E2_2917	0.76	-2.3
3,412,254	-		Pf6N2E2_2917	0.76	-0.0
3,412,254	-		Pf6N2E2_2917	0.76	-0.0
3,412,254	-		Pf6N2E2_2917	0.76	-0.9
3,412,254	-		Pf6N2E2_2917	0.76	-0.0
3,412,265	+		Pf6N2E2_2917	0.76	-0.6
3,412,265	+		Pf6N2E2_2917	0.76	+1.0
3,412,266	-		Pf6N2E2_2917	0.76	+1.0
3,412,266	-		Pf6N2E2_2917	0.76	-0.0
3,412,266	-		Pf6N2E2_2917	0.76	+0.8
3,412,607	+				-0.0
3,412,608	-				-0.6
3,412,619	+				+1.0
3,412,620	-				-0.8
3,412,706	+				-0.3
3,412,706	+				+1.0
3,412,706	+				-1.0
3,412,707	-				+0.6
3,412,721	+				+0.3
3,412,721	+				-0.0
3,412,721	+				-0.2
3,412,721	+				+1.0
3,412,721	+				-0.0
3,412,722	-				+1.0
3,412,722	-				+1.0
3,412,768	+				-0.4
3,412,768	+				+1.0
3,412,781	+				-0.1
3,412,781	+				+1.0
3,412,781	+				-0.2
3,412,781	+				+1.0
3,412,782	-				-1.0
3,412,782	-				-0.4
3,412,848	+				-1.0
3,412,849	-				+0.4
3,412,874	-				+1.0
3,412,874	-				-0.6
3,412,874	-				+1.0
3,412,874	-				+1.0
3,412,874	-				-0.4
3,412,874	-				+1.0
3,412,887	-				+0.2
3,412,894	-				-0.7