Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2893

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,380,852	-		Pf6N2E2_2892	0.18	+1.0
3,380,852	-		Pf6N2E2_2892	0.18	-0.5
3,380,852	-		Pf6N2E2_2892	0.18	-0.1
3,380,852	-		Pf6N2E2_2892	0.18	-0.7
3,380,852	-		Pf6N2E2_2892	0.18	-1.0
3,380,852	-		Pf6N2E2_2892	0.18	-1.7
3,380,852	-		Pf6N2E2_2892	0.18	-1.9
3,381,016	+		Pf6N2E2_2892	0.32	-0.0
3,381,016	+		Pf6N2E2_2892	0.32	-1.1
3,381,016	+		Pf6N2E2_2892	0.32	-1.0
3,381,016	+		Pf6N2E2_2892	0.32	-0.0
3,381,017	-		Pf6N2E2_2892	0.32	+0.7
3,381,017	-		Pf6N2E2_2892	0.32	+0.4
3,381,017	-		Pf6N2E2_2892	0.32	-0.6
3,381,017	-		Pf6N2E2_2892	0.32	+2.6
3,381,017	-		Pf6N2E2_2892	0.32	-0.1
3,381,017	-		Pf6N2E2_2892	0.32	-0.9
3,381,196	+		Pf6N2E2_2892	0.47	+1.0
3,381,196	+		Pf6N2E2_2892	0.47	-0.3
3,381,196	+		Pf6N2E2_2892	0.47	-0.8
3,381,196	+		Pf6N2E2_2892	0.47	+1.0
3,381,196	+		Pf6N2E2_2892	0.47	-1.6
3,381,196	+		Pf6N2E2_2892	0.47	+1.0
3,381,196	+		Pf6N2E2_2892	0.47	+1.0
3,381,197	-		Pf6N2E2_2892	0.47	-0.6
3,381,197	-		Pf6N2E2_2892	0.47	-1.3
3,381,197	-		Pf6N2E2_2892	0.47	-1.3
3,381,197	-		Pf6N2E2_2892	0.47	-0.3
3,381,197	-		Pf6N2E2_2892	0.47	-1.3
3,381,197	-		Pf6N2E2_2892	0.47	-0.4
3,381,197	-		Pf6N2E2_2892	0.47	-1.4
3,381,197	-		Pf6N2E2_2892	0.47	-0.0
3,381,197	-		Pf6N2E2_2892	0.47	-0.0
3,381,197	-		Pf6N2E2_2892	0.47	-0.7
3,381,286	+		Pf6N2E2_2892	0.54	+1.0
3,381,287	-		Pf6N2E2_2892	0.54	-0.2
3,381,406	+		Pf6N2E2_2892	0.64	-0.3
3,381,407	-		Pf6N2E2_2892	0.64	-0.4
3,381,514	+		Pf6N2E2_2892	0.73	-0.0
3,381,514	+		Pf6N2E2_2892	0.73	-0.4
3,381,514	+		Pf6N2E2_2892	0.73	+1.0
3,381,514	+		Pf6N2E2_2892	0.73	+1.0
3,381,514	+		Pf6N2E2_2892	0.73	-0.6
3,381,515	-		Pf6N2E2_2892	0.73	-1.2
3,381,526	+		Pf6N2E2_2892	0.74	-0.0
3,381,526	+		Pf6N2E2_2892	0.74	+1.0
3,381,526	+		Pf6N2E2_2892	0.74	+1.0
3,381,527	-		Pf6N2E2_2892	0.74	-1.6
3,381,752	+				+1.0
3,381,752	+				-0.0
3,381,752	+				+1.0
3,381,753	-				-0.0
3,381,753	-				+0.4
3,381,769	-				+1.0
3,381,839	+				-1.5
3,381,940	+		Pf6N2E2_2893	0.58	+1.0
3,381,941	-		Pf6N2E2_2893	0.58	-0.0
3,381,941	-		Pf6N2E2_2893	0.58	+1.0
3,381,941	-		Pf6N2E2_2893	0.58	-0.6
3,381,946	+		Pf6N2E2_2893	0.61	+1.0
3,381,946	+		Pf6N2E2_2893	0.61	+0.6
3,381,946	+		Pf6N2E2_2893	0.61	-0.6
3,381,947	-		Pf6N2E2_2893	0.61	+0.4
3,381,961	+		Pf6N2E2_2893	0.68	-1.0
3,381,962	-		Pf6N2E2_2893	0.69	-2.0
3,381,962	-		Pf6N2E2_2893	0.69	-0.1
3,381,962	-		Pf6N2E2_2893	0.69	-0.2
3,381,962	-		Pf6N2E2_2893	0.69	+1.2
3,381,998	+		Pf6N2E2_2893	0.86	+0.4
3,381,998	+		Pf6N2E2_2893	0.86	-0.4
3,381,999	-		Pf6N2E2_2893	0.87	+1.0
3,382,056	+				+1.0
3,382,057	-				-1.0
3,382,149	+				-0.0
3,382,149	+				+1.0
3,382,149	+				-0.0
3,382,149	+				+0.3
3,382,150	-				+1.0
3,382,150	-				-1.3
3,382,284	+		Pf6N2E2_2894	0.18	+1.0
3,382,284	+		Pf6N2E2_2894	0.18	-0.6
3,382,284	+		Pf6N2E2_2894	0.18	-0.0
3,382,285	-		Pf6N2E2_2894	0.18	+1.0
3,382,285	-		Pf6N2E2_2894	0.18	+1.0
3,382,395	+		Pf6N2E2_2894	0.27	-0.3
3,382,395	+		Pf6N2E2_2894	0.27	+1.0
3,382,396	-		Pf6N2E2_2894	0.27	+1.0
3,382,396	-		Pf6N2E2_2894	0.27	-0.6
3,382,396	-		Pf6N2E2_2894	0.27	+0.6
3,382,605	+		Pf6N2E2_2894	0.44	+1.4