Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2831

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,318,919	+				+1.0
3,318,920	-				+1.0
3,318,938	+				-0.0
3,318,938	+				-1.0
3,319,054	-		Pf6N2E2_2830	0.11	-0.7
3,319,065	+		Pf6N2E2_2830	0.12	-0.2
3,319,331	+		Pf6N2E2_2830	0.45	-0.6
3,319,359	-		Pf6N2E2_2830	0.49	+1.0
3,319,431	+		Pf6N2E2_2830	0.58	+1.0
3,319,431	+		Pf6N2E2_2830	0.58	-0.4
3,319,431	+		Pf6N2E2_2830	0.58	+1.0
3,319,507	+		Pf6N2E2_2830	0.67	-0.0
3,319,507	+		Pf6N2E2_2830	0.67	+1.0
3,319,731	+				-0.0
3,319,731	+				+0.4
3,320,706	+		Pf6N2E2_2831	0.68	+0.7
3,320,706	+		Pf6N2E2_2831	0.68	+0.3
3,320,828	+		Pf6N2E2_2831	0.77	-0.6
3,320,828	+		Pf6N2E2_2831	0.77	+0.5
3,320,838	+		Pf6N2E2_2831	0.77	-1.4
3,320,839	-		Pf6N2E2_2831	0.78	+1.0
3,320,839	-		Pf6N2E2_2831	0.78	+1.0
3,320,839	-		Pf6N2E2_2831	0.78	-0.0
3,320,950	-		Pf6N2E2_2831	0.86	+1.0
3,321,108	+				+0.3
3,321,108	+				+1.0
3,321,109	-				+1.0
3,321,109	-				-0.6
3,321,109	-				-0.6
3,321,145	+				+1.2
3,321,145	+				-0.0
3,321,145	+				-0.8
3,321,165	-				+1.0
3,321,165	-				+1.0
3,321,165	-				-0.0
3,321,165	-				-0.0
3,321,165	-				-0.8
3,321,165	-				-0.4
3,321,165	-				+0.0
3,321,165	-				-0.0
3,321,317	+				-0.6
3,321,317	+				+0.0
3,321,380	+				-0.0
3,321,380	+				-0.0
3,321,380	+				-0.0
3,321,380	+				+1.0
3,321,381	-				-1.7
3,321,381	-				+1.0
3,321,381	-				-0.0
3,321,381	-				+0.7
3,321,431	+		Pf6N2E2_2832	0.10	-0.0
3,321,431	+		Pf6N2E2_2832	0.10	-0.0
3,321,431	+		Pf6N2E2_2832	0.10	+1.0
3,321,431	+		Pf6N2E2_2832	0.10	-0.6
3,321,432	-		Pf6N2E2_2832	0.10	-0.6
3,321,432	-		Pf6N2E2_2832	0.10	-0.7
3,321,432	-		Pf6N2E2_2832	0.10	-0.0
3,321,470	+		Pf6N2E2_2832	0.13	+1.0
3,321,471	-		Pf6N2E2_2832	0.13	-1.0
3,321,481	+		Pf6N2E2_2832	0.14	-1.0
3,321,481	+		Pf6N2E2_2832	0.14	+1.0
3,321,481	+		Pf6N2E2_2832	0.14	-0.6
3,321,482	-		Pf6N2E2_2832	0.14	-0.1
3,321,482	-		Pf6N2E2_2832	0.14	+1.0
3,321,482	-		Pf6N2E2_2832	0.14	+1.0
3,321,545	+		Pf6N2E2_2832	0.19	+1.0
3,321,545	+		Pf6N2E2_2832	0.19	+1.0
3,321,545	+		Pf6N2E2_2832	0.19	-0.3
3,321,546	-		Pf6N2E2_2832	0.19	+1.0
3,321,546	-		Pf6N2E2_2832	0.19	+1.0
3,321,546	-		Pf6N2E2_2832	0.19	-0.0
3,321,546	-		Pf6N2E2_2832	0.19	-0.0
3,321,546	-		Pf6N2E2_2832	0.19	+1.0
3,321,546	-		Pf6N2E2_2832	0.19	-0.0
3,321,676	-		Pf6N2E2_2832	0.29	+1.0
3,321,728	+		Pf6N2E2_2832	0.33	+1.0
3,321,728	+		Pf6N2E2_2832	0.33	+1.0
3,321,728	+		Pf6N2E2_2832	0.33	-0.0
3,321,728	+		Pf6N2E2_2832	0.33	-2.0
3,321,728	+		Pf6N2E2_2832	0.33	+1.0
3,321,728	+		Pf6N2E2_2832	0.33	+1.0
3,321,729	-				+0.4
3,321,729	-		Pf6N2E2_2832	0.33	+1.0
3,321,755	+		Pf6N2E2_2832	0.35	+1.0
3,321,755	+		Pf6N2E2_2832	0.35	-0.6
3,321,755	+		Pf6N2E2_2832	0.35	-0.0
3,321,756	-		Pf6N2E2_2832	0.35	-0.4
3,321,756	-		Pf6N2E2_2832	0.35	-0.3
3,321,756	-		Pf6N2E2_2832	0.35	+1.0
3,321,797	+		Pf6N2E2_2832	0.38	-0.5
3,321,797	+		Pf6N2E2_2832	0.38	+1.0
3,321,798	-		Pf6N2E2_2832	0.38	+1.0
3,321,798	-		Pf6N2E2_2832	0.38	+1.0
3,321,798	-		Pf6N2E2_2832	0.38	-0.2
3,321,809	+		Pf6N2E2_2832	0.39	-0.2
3,321,809	+		Pf6N2E2_2832	0.39	-0.4
3,321,809	+		Pf6N2E2_2832	0.39	+2.0
3,321,809	+		Pf6N2E2_2832	0.39	+1.0
3,321,809	+		Pf6N2E2_2832	0.39	-0.7
3,321,809	+		Pf6N2E2_2832	0.39	-0.6
3,321,809	+		Pf6N2E2_2832	0.39	-0.6
3,321,809	+		Pf6N2E2_2832	0.39	-0.0
3,321,809	+		Pf6N2E2_2832	0.39	+1.0
3,321,809	+		Pf6N2E2_2832	0.39	+1.0
3,321,809	+		Pf6N2E2_2832	0.39	+1.0
3,321,810	-		Pf6N2E2_2832	0.39	-0.6
3,321,810	-		Pf6N2E2_2832	0.39	-0.3
3,321,810	-		Pf6N2E2_2832	0.39	-0.0
3,321,810	-		Pf6N2E2_2832	0.39	-0.6
3,322,022	+		Pf6N2E2_2832	0.56	-1.0
3,322,023	-		Pf6N2E2_2832	0.56	-0.6
3,322,023	-		Pf6N2E2_2832	0.56	-0.0
3,322,109	+		Pf6N2E2_2832	0.62	+1.0
3,322,109	+		Pf6N2E2_2832	0.62	+1.0