Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2734

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,224,692	+		Pf6N2E2_2732	0.76	-0.2
3,224,692	+		Pf6N2E2_2732	0.76	+1.0
3,224,693	-		Pf6N2E2_2732	0.76	+1.0
3,224,693	-		Pf6N2E2_2732	0.76	+1.0
3,224,693	-		Pf6N2E2_2732	0.76	-0.0
3,224,693	-		Pf6N2E2_2732	0.76	+1.0
3,224,949	-				+1.0
3,225,266	+				-0.0
3,225,266	+				+1.0
3,225,266	+				+1.0
3,225,266	+				+1.0
3,225,267	-				+1.0
3,225,267	-				-0.0
3,225,267	-				+1.0
3,225,311	+				-0.7
3,225,312	-				+1.0
3,225,342	+				+1.0
3,225,353	+				-0.0
3,225,401	+				-2.5
3,225,401	+				+1.0
3,225,572	-		Pf6N2E2_2734	0.19	-1.0
3,225,573	+		Pf6N2E2_2734	0.20	+1.0
3,225,574	-		Pf6N2E2_2734	0.20	-0.0
3,225,744	+		Pf6N2E2_2734	0.38	+1.0
3,225,745	-		Pf6N2E2_2734	0.38	+0.3
3,226,349	+				-0.4
3,226,349	+				-0.4
3,226,349	+				+1.0
3,226,349	+				+1.0
3,226,350	-				-0.0
3,226,373	+				+1.0
3,226,403	+				+1.0
3,226,403	+				-0.0
3,226,403	+				-1.4
3,226,403	+				+1.0
3,226,545	-				+0.3
3,226,782	+		Pf6N2E2_2735	0.11	+1.0
3,226,783	-		Pf6N2E2_2735	0.11	+1.0
3,227,120	+		Pf6N2E2_2735	0.28	-0.0
3,227,121	-		Pf6N2E2_2735	0.28	-1.1
3,227,121	-		Pf6N2E2_2735	0.28	-0.6
3,227,121	-		Pf6N2E2_2735	0.28	-0.5
3,227,138	+		Pf6N2E2_2735	0.28	+0.6
3,227,138	+		Pf6N2E2_2735	0.28	-1.0
3,227,139	-		Pf6N2E2_2735	0.29	-0.1
3,227,213	+		Pf6N2E2_2735	0.32	-0.2
3,227,214	-		Pf6N2E2_2735	0.32	-0.1
3,227,214	-		Pf6N2E2_2735	0.32	-0.0
3,227,249	+		Pf6N2E2_2735	0.34	-1.6
3,227,249	+		Pf6N2E2_2735	0.34	+1.0
3,227,313	-		Pf6N2E2_2735	0.37	+1.0