Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2500

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,948,158	+				+0.9
2,948,193	+				+0.9
2,948,193	+				-0.6
2,948,193	+				-0.7
2,948,193	+				-0.7
2,948,193	+				-0.1
2,948,194	-				-0.1
2,948,194	-				-0.1
2,948,246	+				-0.1
2,948,247	-				-0.7
2,948,253	+				+0.9
2,948,253	+				-0.1
2,948,254	-				+0.9
2,948,254	-				+0.9
2,948,254	-				+0.9
2,948,258	-				-0.1
2,948,540	+		Pf6N2E2_2499	0.54	+0.9
2,948,554	+		Pf6N2E2_2499	0.59	-0.1
2,948,554	+		Pf6N2E2_2499	0.59	-0.1
2,948,554	+		Pf6N2E2_2499	0.59	+0.9
2,948,674	-				-0.1
2,948,679	+				-0.1
2,948,679	+				+0.9
2,948,680	-				-0.5
2,948,680	-				+0.5
2,948,692	+				-1.1
2,948,715	+				-0.1
2,948,716	-				-0.7
2,948,785	+				+0.9
2,948,786	-				-0.6
2,948,797	+				+0.9
2,948,801	+				+0.9
2,949,068	-				+0.9
2,949,128	-				+0.9
2,949,233	-				+0.9
2,949,246	+				+0.9
2,949,271	-		Pf6N2E2_2500	0.12	+0.3
2,949,292	-		Pf6N2E2_2500	0.13	-1.4
2,949,384	-		Pf6N2E2_2500	0.22	-0.3
2,949,397	-		Pf6N2E2_2500	0.23	+0.9
2,949,473	+		Pf6N2E2_2500	0.30	-0.1
2,949,501	+		Pf6N2E2_2500	0.33	+0.9
2,949,502	-		Pf6N2E2_2500	0.33	+1.9
2,949,541	-		Pf6N2E2_2500	0.36	+0.3
2,949,587	-		Pf6N2E2_2500	0.40	-0.1
2,950,076	-		Pf6N2E2_2500	0.85	+0.9
2,950,118	+		Pf6N2E2_2500	0.89	+0.7
2,950,192	+				+1.5
2,950,211	-				+0.9
2,950,259	+				+0.9
2,950,282	+				-0.3
2,950,310	+				+0.9
2,950,379	-				+0.9
2,950,457	-		Pf6N2E2_2501	0.53	+0.9
2,950,457	-		Pf6N2E2_2501	0.53	-0.7
2,950,459	-		Pf6N2E2_2501	0.54	+1.3
2,950,540	-				+0.9
2,950,618	-				+0.9
2,950,785	-				+0.9
2,951,169	+		Pf6N2E2_2502	0.28	-0.1