Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2489

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,934,146	+		Pf6N2E2_2487	0.60	-1.4
2,934,457	+				-0.1
2,934,458	-				-0.1
2,934,527	-				+0.8
2,934,527	-				-0.5
2,934,527	-				+0.9
2,934,527	-				+0.9
2,934,584	+				+0.9
2,934,585	-		Pf6N2E2_2488	0.10	-0.6
2,934,680	+		Pf6N2E2_2488	0.43	-0.1
2,934,850	+				+0.9
2,934,851	-				-0.1
2,934,880	+				+1.9
2,934,880	+				-0.1
2,934,881	-				-0.3
2,934,881	-				-2.1
2,934,881	-				-0.4
2,934,883	+				-0.1
2,934,883	+				-0.1
2,934,884	-				+0.9
2,934,884	-				+0.9
2,934,884	-				+0.6
2,934,884	-				+0.9
2,934,925	-				-0.1
2,934,946	+				+0.9
2,934,946	+				-0.9
2,934,946	+				+0.9
2,934,946	+				-0.3
2,935,102	+				-1.1
2,935,145	-				-0.1
2,935,145	-				+0.4
2,935,198	+		Pf6N2E2_2489	0.14	+0.9
2,935,198	+		Pf6N2E2_2489	0.14	-0.1
2,935,198	+		Pf6N2E2_2489	0.14	+0.9
2,935,198	+		Pf6N2E2_2489	0.14	+0.9
2,935,198	+		Pf6N2E2_2489	0.14	-0.1
2,935,198	+		Pf6N2E2_2489	0.14	+0.9
2,935,199	-		Pf6N2E2_2489	0.14	+0.3
2,935,199	-		Pf6N2E2_2489	0.14	+0.9
2,935,250	-		Pf6N2E2_2489	0.19	+0.9
2,935,271	+		Pf6N2E2_2489	0.21	+0.9
2,935,372	+		Pf6N2E2_2489	0.31	+1.9
2,935,939	+		Pf6N2E2_2489	0.85	-1.1
2,935,939	+		Pf6N2E2_2489	0.85	-0.1
2,936,011	+				+0.5
2,936,011	+				-0.2
2,936,012	-				-1.1
2,936,058	+				+0.4
2,936,059	-				-1.1
2,936,272	-				+0.9
2,936,388	+		Pf6N2E2_2490	0.17	+0.9
2,936,490	+		Pf6N2E2_2490	0.31	-0.5
2,936,668	-		Pf6N2E2_2490	0.57	+0.9
2,936,668	-		Pf6N2E2_2490	0.57	-0.1
2,936,883	+		Pf6N2E2_2490	0.88	+0.9
2,936,883	+		Pf6N2E2_2490	0.88	+0.9
2,936,883	+		Pf6N2E2_2490	0.88	+0.9
2,936,883	+		Pf6N2E2_2490	0.88	-0.6
2,936,883	+		Pf6N2E2_2490	0.88	-2.4
2,936,884	-		Pf6N2E2_2490	0.88	-0.5
2,937,009	-				-0.2
2,937,067	-				+0.9