Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2417

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,868,718	-				-0.0
2,868,718	-				+0.5
2,868,740	+				+1.0
2,868,741	-				+1.0
2,868,963	+				+0.1
2,868,963	+				-1.1
2,868,963	+				-0.0
2,868,963	+				+1.0
2,868,963	+				+0.2
2,868,963	+				+1.0
2,868,963	+				+1.0
2,868,963	+				-0.0
2,868,964	-				-0.0
2,868,964	-				+1.0
2,868,964	-				-0.2
2,868,964	-				-0.4
2,868,964	-				+1.0
2,868,964	-				+1.0
2,868,964	-				+0.4
2,868,964	-				+1.0
2,868,964	-				+0.7
2,868,964	-				+1.0
2,869,102	+		Pf6N2E2_2416	0.28	-0.1
2,869,102	+		Pf6N2E2_2416	0.28	+0.2
2,869,102	+		Pf6N2E2_2416	0.28	+1.0
2,869,102	+		Pf6N2E2_2416	0.28	+1.0
2,869,102	+		Pf6N2E2_2416	0.28	-1.3
2,869,102	+		Pf6N2E2_2416	0.28	+2.0
2,869,103	-		Pf6N2E2_2416	0.29	+1.0
2,869,103	-		Pf6N2E2_2416	0.29	+1.0
2,869,103	-		Pf6N2E2_2416	0.29	-0.0
2,869,103	-		Pf6N2E2_2416	0.29	+1.0
2,869,103	-		Pf6N2E2_2416	0.29	-0.0
2,869,103	-		Pf6N2E2_2416	0.29	-1.6
2,869,103	-		Pf6N2E2_2416	0.29	+1.0
2,869,103	-		Pf6N2E2_2416	0.29	-1.3
2,869,180	+		Pf6N2E2_2416	0.45	+1.0
2,869,180	+		Pf6N2E2_2416	0.45	-0.3
2,869,472	+				-0.5
2,869,512	+				+1.0
2,869,513	-				-0.6
2,869,524	+				+1.0
2,869,524	+				-0.0
2,869,525	-				-0.6
2,869,527	+				+1.0
2,869,528	-				-0.0
2,869,528	-				+1.0
2,869,669	-				+1.0
2,869,669	-				+1.0
2,869,672	+				-0.0
2,869,673	-				-0.6
2,869,673	-				-0.6
2,869,673	-				+1.0
2,869,673	-				-0.0
2,869,673	-				-0.6
2,869,673	-				-1.0
2,869,736	+				+1.0
2,869,736	+				+0.4
2,869,736	+				+1.0
2,869,736	+				+1.0
2,869,736	+				+1.0
2,869,737	-				+1.0
2,869,737	-				+1.0
2,869,737	-				-0.3
2,869,739	+				-0.0
2,869,740	-				-0.0
2,869,740	-				+1.0
2,869,740	-				-0.0
2,869,746	+				+1.0
2,869,746	+				+0.3
2,869,746	+				-0.5
2,869,746	+				-0.0
2,869,747	-				+1.0
2,869,777	+		Pf6N2E2_2417	0.12	-0.2
2,869,778	-		Pf6N2E2_2417	0.12	+1.0
2,869,789	+		Pf6N2E2_2417	0.13	+1.0
2,869,815	-		Pf6N2E2_2417	0.16	+1.0
2,869,815	-		Pf6N2E2_2417	0.16	+1.0
2,870,315	+		Pf6N2E2_2417	0.72	+1.0
2,870,315	+		Pf6N2E2_2417	0.72	+1.0
2,870,316	-		Pf6N2E2_2417	0.72	-0.1
2,870,541	+				+1.0
2,870,547	+				+1.0
2,870,548	-				-1.6
2,870,548	-				-0.7
2,870,548	-				+0.3
2,870,548	-				+0.7
2,870,814	-		Pf6N2E2_2418	0.39	-0.1
2,871,044	-		Pf6N2E2_2418	0.73	-1.6
2,871,082	+		Pf6N2E2_2418	0.79	+1.0
2,871,082	+		Pf6N2E2_2418	0.79	+0.0
2,871,082	+		Pf6N2E2_2418	0.79	+0.3
2,871,305	-		Pf6N2E2_2419	0.11	-0.0
2,871,305	-		Pf6N2E2_2419	0.11	+1.0
2,871,432	+		Pf6N2E2_2419	0.25	+1.0
2,871,432	+		Pf6N2E2_2419	0.25	+1.0
2,871,432	+		Pf6N2E2_2419	0.25	-0.0
2,871,432	+		Pf6N2E2_2419	0.25	+0.4
2,871,432	+		Pf6N2E2_2419	0.25	-0.6
2,871,432	+		Pf6N2E2_2419	0.25	+1.0
2,871,433	-		Pf6N2E2_2419	0.25	-1.2
2,871,433	-		Pf6N2E2_2419	0.25	+1.0
2,871,433	-		Pf6N2E2_2419	0.25	+1.0