Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2396

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,833,893	+		Pf6N2E2_2395	0.58	+1.0
2,834,242	+		Pf6N2E2_2395	0.82	+1.0
2,834,313	+		Pf6N2E2_2395	0.87	-0.0
2,834,313	+		Pf6N2E2_2395	0.87	+1.0
2,834,313	+		Pf6N2E2_2395	0.87	+1.0
2,834,313	+		Pf6N2E2_2395	0.87	-1.0
2,834,313	+		Pf6N2E2_2395	0.87	-0.0
2,834,313	+		Pf6N2E2_2395	0.87	+1.0
2,834,313	+		Pf6N2E2_2395	0.87	+0.3
2,834,314	-		Pf6N2E2_2395	0.87	+0.1
2,834,314	-		Pf6N2E2_2395	0.87	+1.0
2,834,314	-		Pf6N2E2_2395	0.87	-0.0
2,834,314	-		Pf6N2E2_2395	0.87	+1.0
2,834,421	+				+1.0
2,834,421	+				-0.6
2,834,421	+				+1.0
2,834,515	+				+1.0
2,834,515	+				-0.4
2,834,516	-				+1.0
2,834,516	-				-0.0
2,834,516	-				+1.0
2,834,516	-				-1.0
2,834,516	-				-0.0
2,834,519	+				+1.0
2,834,519	+				-0.0
2,834,519	+				+1.0
2,834,520	-				+0.6
2,834,613	-				-0.5
2,835,108	-		Pf6N2E2_2396	0.21	+1.0
2,835,198	+		Pf6N2E2_2396	0.27	-0.6
2,835,198	+		Pf6N2E2_2396	0.27	-0.0
2,835,198	+		Pf6N2E2_2396	0.27	+1.0
2,835,199	-		Pf6N2E2_2396	0.27	-0.0
2,835,302	+		Pf6N2E2_2396	0.35	-0.0
2,835,303	-		Pf6N2E2_2396	0.35	-0.0
2,835,303	-		Pf6N2E2_2396	0.35	-1.3
2,835,303	-		Pf6N2E2_2396	0.35	+1.0
2,835,723	+		Pf6N2E2_2396	0.67	-1.0
2,836,265	-		Pf6N2E2_2397	0.15	+1.0
2,836,443	+		Pf6N2E2_2397	0.41	+1.0
2,836,444	-		Pf6N2E2_2397	0.41	+1.0
2,836,444	-		Pf6N2E2_2397	0.41	+1.0
2,836,846	+				+1.0
2,836,847	-				-0.3
2,836,847	-				+0.2
2,836,847	-				+1.0
2,836,865	+				+1.0
2,836,865	+				+1.0
2,836,865	+				-1.2
2,836,866	-				-0.6
2,836,870	+				+1.0
2,836,871	-				+1.0
2,836,871	-				-0.6
2,836,871	-				+1.0
2,836,897	+				-0.6
2,837,006	+				-1.6
2,837,014	+				-0.7