Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2365

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,798,465	+		Pf6N2E2_2363	0.14	+1.0
2,798,659	+		Pf6N2E2_2363	0.38	+0.7
2,798,693	+		Pf6N2E2_2363	0.43	+1.0
2,798,745	-		Pf6N2E2_2363	0.49	-0.6
2,798,908	+		Pf6N2E2_2363	0.69	-0.6
2,798,985	-		Pf6N2E2_2363	0.79	+1.0
2,799,125	+				-0.0
2,799,126	-				+1.0
2,799,159	+				+1.0
2,799,440	+				-0.0
2,799,599	+		Pf6N2E2_2365	0.27	-0.1
2,799,599	+		Pf6N2E2_2365	0.27	+0.6
2,799,599	+		Pf6N2E2_2365	0.27	-0.6
2,799,605	+		Pf6N2E2_2365	0.28	-0.0
2,799,605	+		Pf6N2E2_2365	0.28	-0.0
2,799,605	+		Pf6N2E2_2365	0.28	-0.0
2,799,606	-		Pf6N2E2_2365	0.28	+1.3
2,799,768	-		Pf6N2E2_2365	0.53	-0.0
2,799,779	+		Pf6N2E2_2365	0.54	-0.3
2,799,788	+		Pf6N2E2_2365	0.56	+0.6
2,799,789	-		Pf6N2E2_2365	0.56	-1.0
2,799,789	-		Pf6N2E2_2365	0.56	-0.0
2,799,838	-		Pf6N2E2_2365	0.63	+1.0
2,799,860	+		Pf6N2E2_2365	0.67	-0.0
2,799,860	+		Pf6N2E2_2365	0.67	-0.3
2,799,860	+		Pf6N2E2_2365	0.67	+1.0
2,799,860	+		Pf6N2E2_2365	0.67	-0.2
2,799,860	+		Pf6N2E2_2365	0.67	+1.0
2,799,861	-		Pf6N2E2_2365	0.67	-1.1
2,799,861	-		Pf6N2E2_2365	0.67	-0.1
2,799,861	-		Pf6N2E2_2365	0.67	+2.0
2,799,864	-		Pf6N2E2_2365	0.67	-0.6
2,799,864	-		Pf6N2E2_2365	0.67	-0.0
2,800,004	+		Pf6N2E2_2365	0.88	-0.0
2,800,005	-		Pf6N2E2_2365	0.88	-0.6
2,800,370	+		Pf6N2E2_2366	0.78	-0.2
2,800,371	-		Pf6N2E2_2366	0.78	+0.3
2,800,371	-		Pf6N2E2_2366	0.78	+1.0
2,800,371	-		Pf6N2E2_2366	0.78	+1.0
2,800,371	-		Pf6N2E2_2366	0.78	-0.4
2,800,384	+		Pf6N2E2_2366	0.82	-0.0
2,800,385	-		Pf6N2E2_2366	0.82	-0.6
2,800,878	-				-0.0