Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2262

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,676,905	+		Pf6N2E2_2261	0.11	+0.9
2,676,905	+				+0.9
2,676,905	+				+0.9
2,676,905	+		Pf6N2E2_2261	0.11	-0.1
2,676,905	+		Pf6N2E2_2261	0.11	+0.9
2,676,905	+				+0.9
2,676,905	+		Pf6N2E2_2261	0.11	+0.9
2,676,906	-		Pf6N2E2_2261	0.11	+0.9
2,676,906	-		Pf6N2E2_2261	0.11	+0.9
2,676,906	-		Pf6N2E2_2261	0.11	+0.9
2,676,906	-		Pf6N2E2_2261	0.11	+0.9
2,676,984	+		Pf6N2E2_2261	0.22	+0.9
2,677,006	-		Pf6N2E2_2261	0.26	+0.9
2,677,006	-				-0.1
2,677,007	+		Pf6N2E2_2261	0.26	+0.9
2,677,007	+		Pf6N2E2_2261	0.26	+0.9
2,677,008	-		Pf6N2E2_2261	0.26	+0.9
2,677,008	-		Pf6N2E2_2261	0.26	+0.9
2,677,013	+				+0.9
2,677,025	+		Pf6N2E2_2261	0.28	+0.9
2,677,026	-		Pf6N2E2_2261	0.29	-0.1
2,677,026	-		Pf6N2E2_2261	0.29	+0.9
2,677,026	-		Pf6N2E2_2261	0.29	+0.9
2,677,087	+				-0.1
2,677,087	+		Pf6N2E2_2261	0.37	+0.9
2,677,087	+		Pf6N2E2_2261	0.37	-0.1
2,677,088	-		Pf6N2E2_2261	0.38	+0.9
2,677,088	-		Pf6N2E2_2261	0.38	+0.9
2,677,088	-		Pf6N2E2_2261	0.38	+0.9
2,677,088	-		Pf6N2E2_2261	0.38	-0.7
2,677,088	-		Pf6N2E2_2261	0.38	+0.9
2,677,088	-		Pf6N2E2_2261	0.38	+0.9
2,677,088	-		Pf6N2E2_2261	0.38	+0.9
2,677,091	+		Pf6N2E2_2261	0.38	+0.9
2,677,091	+				+0.9
2,677,092	-		Pf6N2E2_2261	0.38	-0.1
2,677,092	-		Pf6N2E2_2261	0.38	-0.1
2,677,092	-		Pf6N2E2_2261	0.38	+0.9
2,677,340	+		Pf6N2E2_2261	0.74	-0.1
2,677,340	+		Pf6N2E2_2261	0.74	+0.9
2,677,340	+		Pf6N2E2_2261	0.74	+0.9
2,677,341	-		Pf6N2E2_2261	0.74	+0.9
2,677,373	+				+0.9
2,677,374	-		Pf6N2E2_2261	0.79	+0.9
2,677,374	-		Pf6N2E2_2261	0.79	+0.9
2,677,377	+		Pf6N2E2_2261	0.79	-1.1
2,677,377	+		Pf6N2E2_2261	0.79	-0.1
2,677,378	-		Pf6N2E2_2261	0.80	+0.9
2,677,378	-		Pf6N2E2_2261	0.80	-0.1
2,677,398	+		Pf6N2E2_2261	0.82	+0.9
2,677,577	+				+0.9
2,677,578	-				-0.1
2,677,580	+				+0.9
2,677,580	+				+0.9
2,677,580	+				+0.9
2,677,580	+				+0.9
2,677,581	-				-0.1
2,677,581	-				+0.6
2,677,581	-				-0.1
2,677,581	-				+0.9
2,677,582	+				+0.9
2,677,583	-				-0.2
2,677,630	+				+0.9
2,677,630	+				+0.9
2,677,630	+				+0.9
2,677,631	-				-0.7
2,677,631	-				+0.9
2,677,704	+				+0.9
2,677,704	+				-0.7
2,677,704	+				-0.1
2,677,705	-				+0.9
2,677,705	-				+0.9
2,677,771	+				+0.3
2,678,003	+		Pf6N2E2_2262	0.45	-0.7
2,678,242	+		Pf6N2E2_2262	0.84	+0.9
2,678,242	+		Pf6N2E2_2262	0.84	+0.2
2,678,242	+		Pf6N2E2_2262	0.84	+0.9
2,678,243	-		Pf6N2E2_2262	0.84	-0.3
2,678,243	-		Pf6N2E2_2262	0.84	+0.2
2,678,374	+				+0.9
2,678,374	+				-0.1
2,678,375	-				-0.7
2,678,375	-				-0.7
2,678,375	-				+0.9
2,678,375	-				+0.9
2,678,380	+				-0.1
2,678,380	+				-1.4
2,678,381	-				-1.1
2,678,430	+				+0.9
2,678,437	-				-0.2
2,678,445	+				-0.7
2,678,446	-				-0.4
2,678,543	+		Pf6N2E2_2263	0.34	-0.1
2,678,544	-		Pf6N2E2_2263	0.35	-1.7
2,678,544	-		Pf6N2E2_2263	0.35	+0.9
2,678,619	+		Pf6N2E2_2263	0.63	+0.9
2,678,619	+		Pf6N2E2_2263	0.63	-0.1
2,678,619	+		Pf6N2E2_2263	0.63	+0.9
2,678,620	-		Pf6N2E2_2263	0.64	-0.1
2,678,620	-		Pf6N2E2_2263	0.64	-1.5
2,678,620	-		Pf6N2E2_2263	0.64	-0.1
2,678,620	-		Pf6N2E2_2263	0.64	+0.9
2,678,620	-		Pf6N2E2_2263	0.64	+0.9
2,678,621	+		Pf6N2E2_2263	0.64	+0.9
2,678,621	+		Pf6N2E2_2263	0.64	-0.5
2,678,621	+		Pf6N2E2_2263	0.64	+0.9
2,678,621	+		Pf6N2E2_2263	0.64	+0.9
2,678,621	+		Pf6N2E2_2263	0.64	-0.1
2,678,621	+		Pf6N2E2_2263	0.64	-0.7
2,678,622	-		Pf6N2E2_2263	0.64	+0.9
2,678,622	-		Pf6N2E2_2263	0.64	-0.1
2,678,622	-		Pf6N2E2_2263	0.64	-0.1
2,678,622	-		Pf6N2E2_2263	0.64	-0.4
2,678,622	-		Pf6N2E2_2263	0.64	-0.7
2,678,622	-		Pf6N2E2_2263	0.64	-0.1
2,678,703	+				-0.6
2,678,704	-				+0.9
2,678,722	+				+0.9
2,678,722	+				-0.4
2,678,722	+				-0.1
2,678,722	+				+0.9
2,678,723	-				+0.9
2,678,742	-				-1.1
2,678,761	-				+0.9
2,678,799	+				-0.1
2,678,799	+				+0.2
2,678,800	-				+0.9
2,678,850	+				-0.1
2,678,892	-		Pf6N2E2_2264	0.10	+0.9
2,678,901	-		Pf6N2E2_2264	0.11	-0.7
2,679,002	+		Pf6N2E2_2264	0.24	+1.9
2,679,002	+		Pf6N2E2_2264	0.24	-1.1
2,679,003	-		Pf6N2E2_2264	0.24	+0.9
2,679,003	-		Pf6N2E2_2264	0.24	-0.7
2,679,173	+		Pf6N2E2_2264	0.44	-0.8
2,679,173	+		Pf6N2E2_2264	0.44	-0.1
2,679,229	-		Pf6N2E2_2264	0.51	+0.9
2,679,229	-		Pf6N2E2_2264	0.51	-1.1