Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2158

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,561,902	+		Pf6N2E2_2157	0.49	+0.9
2,561,952	+		Pf6N2E2_2157	0.55	+0.9
2,561,952	+		Pf6N2E2_2157	0.55	-0.1
2,561,953	-		Pf6N2E2_2157	0.55	-0.6
2,561,953	-		Pf6N2E2_2157	0.55	-0.2
2,561,953	-		Pf6N2E2_2157	0.55	+0.9
2,561,953	-		Pf6N2E2_2157	0.55	+0.9
2,561,953	-		Pf6N2E2_2157	0.55	+0.9
2,562,231	+		Pf6N2E2_2157	0.85	+0.9
2,562,231	+		Pf6N2E2_2157	0.85	-0.4
2,562,231	+		Pf6N2E2_2157	0.85	+0.9
2,562,232	-		Pf6N2E2_2157	0.85	+0.9
2,562,232	-		Pf6N2E2_2157	0.85	+0.9
2,562,232	-		Pf6N2E2_2157	0.85	+0.9
2,562,232	-		Pf6N2E2_2157	0.85	-0.7
2,562,259	-		Pf6N2E2_2157	0.88	-0.4
2,562,524	+				-0.1
2,562,525	-				-0.7
2,562,738	+		Pf6N2E2_2158	0.39	-0.1
2,562,738	+		Pf6N2E2_2158	0.39	+1.9
2,562,738	+		Pf6N2E2_2158	0.39	-0.1
2,562,738	+		Pf6N2E2_2158	0.39	+0.9
2,562,738	+		Pf6N2E2_2158	0.39	-0.4
2,562,739	-		Pf6N2E2_2158	0.39	+0.4
2,562,739	-		Pf6N2E2_2158	0.39	+1.9
2,562,739	-		Pf6N2E2_2158	0.39	+0.5
2,562,739	-		Pf6N2E2_2158	0.39	-0.7
2,562,739	-		Pf6N2E2_2158	0.39	-1.1
2,562,739	-		Pf6N2E2_2158	0.39	+0.9
2,563,274	-		Pf6N2E2_2159	0.20	+0.9
2,563,312	-		Pf6N2E2_2159	0.25	+0.9
2,563,312	-		Pf6N2E2_2159	0.25	+0.9
2,563,391	+		Pf6N2E2_2159	0.36	+0.9
2,563,429	+		Pf6N2E2_2159	0.42	-0.2
2,563,429	+		Pf6N2E2_2159	0.42	-0.1
2,563,429	+		Pf6N2E2_2159	0.42	-0.7
2,563,429	+		Pf6N2E2_2159	0.42	+0.9
2,563,430	-		Pf6N2E2_2159	0.42	-0.1
2,563,430	-		Pf6N2E2_2159	0.42	+0.9
2,563,489	+		Pf6N2E2_2159	0.50	-0.3
2,563,489	+		Pf6N2E2_2159	0.50	-0.2
2,563,489	+		Pf6N2E2_2159	0.50	+0.9
2,563,489	+		Pf6N2E2_2159	0.50	+0.9
2,563,489	+		Pf6N2E2_2159	0.50	-0.1
2,563,490	-		Pf6N2E2_2159	0.50	+0.9
2,563,564	+		Pf6N2E2_2159	0.60	+0.9
2,563,564	+		Pf6N2E2_2159	0.60	+0.2
2,563,565	-		Pf6N2E2_2159	0.61	+0.9
2,563,613	+		Pf6N2E2_2159	0.67	+0.9
2,563,639	+		Pf6N2E2_2159	0.71	+0.9
2,563,639	+		Pf6N2E2_2159	0.71	-0.5
2,563,639	+		Pf6N2E2_2159	0.71	-0.9
2,563,640	-		Pf6N2E2_2159	0.71	+0.1
2,563,640	-		Pf6N2E2_2159	0.71	-0.1
2,563,640	-		Pf6N2E2_2159	0.71	+0.9
2,563,640	-		Pf6N2E2_2159	0.71	-0.4
2,563,640	-		Pf6N2E2_2159	0.71	+0.9
2,563,640	-		Pf6N2E2_2159	0.71	-1.1
2,563,645	+		Pf6N2E2_2159	0.72	-0.1
2,563,759	+		Pf6N2E2_2159	0.88	-1.1
2,563,760	-		Pf6N2E2_2159	0.88	-0.7
2,563,760	-		Pf6N2E2_2159	0.88	-0.1
2,563,841	+				-0.8
2,563,841	+				-0.7
2,563,842	-				+0.9
2,564,029	+				-0.7
2,564,080	-				-1.1
2,564,089	+				+0.9
2,564,089	+				-0.1
2,564,089	+				+0.9
2,564,090	-				+0.5
2,564,090	-				-0.1