Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2099

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,496,714	+		Pf6N2E2_2097	0.73	-0.1
2,496,715	-		Pf6N2E2_2097	0.73	+0.9
2,496,715	-		Pf6N2E2_2097	0.73	-1.1
2,496,729	+		Pf6N2E2_2097	0.75	+0.9
2,496,729	+		Pf6N2E2_2097	0.75	+0.9
2,496,730	-		Pf6N2E2_2097	0.75	+0.9
2,496,730	-		Pf6N2E2_2097	0.75	+0.9
2,496,919	+				+0.3
2,496,919	+				+0.9
2,497,031	-		Pf6N2E2_2098	0.12	+0.9
2,497,120	+		Pf6N2E2_2098	0.29	-0.7
2,497,236	+		Pf6N2E2_2098	0.51	-0.8
2,497,236	+		Pf6N2E2_2098	0.51	+0.9
2,497,236	+		Pf6N2E2_2098	0.51	-0.1
2,497,237	-		Pf6N2E2_2098	0.52	+0.9
2,497,302	+		Pf6N2E2_2098	0.64	-0.1
2,497,303	-		Pf6N2E2_2098	0.64	+0.9
2,497,303	-		Pf6N2E2_2098	0.64	+0.9
2,497,582	+				+0.9
2,497,630	+				+0.9
2,497,631	-				-0.7
2,497,837	-		Pf6N2E2_2099	0.57	+0.9
2,497,976	-				-0.5
2,498,036	-				+0.9
2,498,036	-				+0.9
2,498,069	+				+0.9
2,498,070	-				-0.7
2,498,070	-				+0.9
2,498,178	+				-0.1
2,498,218	+				+0.9
2,498,219	-				+0.9
2,498,219	-				+0.9
2,498,263	+				+0.9
2,498,263	+				+0.9
2,498,263	+				+0.9
2,498,264	-				-0.1
2,498,264	-				-0.1
2,498,264	-				+0.9
2,498,264	-				+0.9
2,498,264	-				-0.1
2,498,264	-				+0.9
2,498,264	-				-0.1
2,498,264	-				+0.9
2,498,408	-				+0.9
2,498,408	-				-0.9
2,498,420	-				-1.1
2,498,500	+		Pf6N2E2_2100	0.13	-0.8
2,498,500	+		Pf6N2E2_2100	0.13	-0.7
2,498,500	+		Pf6N2E2_2100	0.13	+0.5
2,498,500	+		Pf6N2E2_2100	0.13	+0.3
2,498,501	-		Pf6N2E2_2100	0.13	-0.8
2,498,501	-		Pf6N2E2_2100	0.13	-0.7
2,498,711	-		Pf6N2E2_2100	0.23	+0.9