Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1810

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,141,488	+		Pf6N2E2_1809	0.50	+0.9
2,141,732	+		Pf6N2E2_1809	0.66	-0.1
2,141,733	-		Pf6N2E2_1809	0.66	+0.9
2,141,738	+		Pf6N2E2_1809	0.67	-0.1
2,142,155	+				-1.7
2,142,167	+				+0.9
2,142,243	-				-1.1
2,142,536	+		Pf6N2E2_1810	0.21	+0.9
2,142,536	+		Pf6N2E2_1810	0.21	+0.9
2,142,537	-		Pf6N2E2_1810	0.21	+0.9
2,142,537	-		Pf6N2E2_1810	0.21	-0.5
2,142,606	-		Pf6N2E2_1810	0.28	+1.2
2,142,953	+		Pf6N2E2_1810	0.66	+0.9
2,143,196	+				+0.9
2,143,196	+				+0.9
2,143,196	+				+0.9
2,143,196	+				-1.5
2,143,197	-				+0.9
2,143,271	+				+0.1
2,143,272	-				+0.9
2,143,272	-				+0.9
2,143,307	+				-0.2
2,143,436	+		Pf6N2E2_1811	0.18	-1.4
2,143,437	-		Pf6N2E2_1811	0.18	-0.1
2,143,508	+		Pf6N2E2_1811	0.26	+0.9
2,143,508	+		Pf6N2E2_1811	0.26	+0.9
2,143,508	+		Pf6N2E2_1811	0.26	-0.6
2,143,672	+		Pf6N2E2_1811	0.44	+0.9
2,143,680	-		Pf6N2E2_1811	0.45	+0.9
2,143,848	-		Pf6N2E2_1811	0.64	-0.1
2,144,055	-		Pf6N2E2_1811	0.86	+0.9
2,144,055	-		Pf6N2E2_1811	0.86	-0.1
2,144,055	-		Pf6N2E2_1811	0.86	+0.9
2,144,055	-		Pf6N2E2_1811	0.86	+0.9
2,144,055	-		Pf6N2E2_1811	0.86	+0.9
2,144,055	-		Pf6N2E2_1811	0.86	-0.8
2,144,190	+				-0.1
2,144,190	+				-0.1
2,144,190	+				+0.9
2,144,191	-				-0.1
2,144,191	-				+0.9
2,144,191	-				+0.9
2,144,194	-				+0.9
2,144,194	-				-0.1
2,144,194	-				-1.5
2,144,215	+				+0.9
2,144,216	-				+0.9