Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1639

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,940,608	+		Pf6N2E2_1638	0.25	+0.8
1,940,692	+		Pf6N2E2_1638	0.32	+0.8
1,940,692	+		Pf6N2E2_1638	0.32	+0.8
1,940,729	-		Pf6N2E2_1638	0.35	+0.8
1,940,729	-		Pf6N2E2_1638	0.35	-0.2
1,940,929	+		Pf6N2E2_1638	0.52	+0.8
1,940,930	-		Pf6N2E2_1638	0.52	-0.2
1,940,930	-		Pf6N2E2_1638	0.52	-1.3
1,940,930	-		Pf6N2E2_1638	0.52	-0.2
1,940,977	-		Pf6N2E2_1638	0.56	-0.2
1,941,070	+		Pf6N2E2_1638	0.63	-0.8
1,941,070	+		Pf6N2E2_1638	0.63	+0.8
1,941,071	-		Pf6N2E2_1638	0.63	+0.8
1,941,152	-		Pf6N2E2_1638	0.70	-0.2
1,941,152	-		Pf6N2E2_1638	0.70	+0.8
1,941,190	+		Pf6N2E2_1638	0.73	-0.3
1,941,190	+		Pf6N2E2_1638	0.73	-0.2
1,941,191	-		Pf6N2E2_1638	0.73	+0.8
1,941,191	-		Pf6N2E2_1638	0.73	-0.5
1,941,662	+		Pf6N2E2_1639	0.27	-0.2
1,941,662	+		Pf6N2E2_1639	0.27	+0.8
1,941,664	+		Pf6N2E2_1639	0.27	-0.2
1,941,664	+		Pf6N2E2_1639	0.27	-0.2
1,941,665	-		Pf6N2E2_1639	0.28	-0.5
1,941,665	-		Pf6N2E2_1639	0.28	-0.8
1,941,665	-		Pf6N2E2_1639	0.28	+0.8
1,941,665	-		Pf6N2E2_1639	0.28	-1.2
1,941,754	-		Pf6N2E2_1639	0.50	-0.8
1,941,754	-		Pf6N2E2_1639	0.50	+0.8
1,941,754	-		Pf6N2E2_1639	0.50	-1.6
1,941,754	-		Pf6N2E2_1639	0.50	-0.2
1,941,900	+		Pf6N2E2_1639	0.85	-1.4
1,942,049	-				+0.8
1,942,049	-				+0.8
1,942,049	-				+0.8
1,942,049	-				+0.8
1,942,049	-				-0.6
1,942,049	-				-0.5
1,942,679	+		Pf6N2E2_1640	0.30	-0.2
1,942,680	-		Pf6N2E2_1640	0.30	+0.8
1,942,697	-		Pf6N2E2_1640	0.31	+0.8
1,942,789	+		Pf6N2E2_1640	0.35	+0.8
1,942,829	-		Pf6N2E2_1640	0.36	-0.2
1,942,829	-		Pf6N2E2_1640	0.36	+0.8