Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1553

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,811,334	-				+0.8
1,811,334	-				-1.4
1,811,334	-				+0.8
1,811,728	-		Pf6N2E2_1552	0.45	+0.8
1,811,876	+		Pf6N2E2_1552	0.61	+0.8
1,811,898	+		Pf6N2E2_1552	0.63	+0.8
1,811,898	+		Pf6N2E2_1552	0.63	+0.8
1,811,922	+		Pf6N2E2_1552	0.66	+0.8
1,811,923	-		Pf6N2E2_1552	0.66	-0.6
1,811,923	-		Pf6N2E2_1552	0.66	+0.8
1,811,923	-		Pf6N2E2_1552	0.66	-0.2
1,811,979	+		Pf6N2E2_1552	0.72	-0.2
1,811,980	-		Pf6N2E2_1552	0.72	-0.5
1,812,045	+		Pf6N2E2_1552	0.79	-0.6
1,812,069	+		Pf6N2E2_1552	0.82	-0.2
1,812,069	+		Pf6N2E2_1552	0.82	+0.8
1,812,158	-				+0.6
1,812,158	-				-0.2
1,812,450	+		Pf6N2E2_1553	0.21	-0.2
1,812,450	+		Pf6N2E2_1553	0.21	-0.8
1,812,450	+		Pf6N2E2_1553	0.21	+0.2
1,812,450	+		Pf6N2E2_1553	0.21	-0.2
1,812,450	+		Pf6N2E2_1553	0.21	-0.2
1,812,450	+		Pf6N2E2_1553	0.21	+0.8
1,812,450	+		Pf6N2E2_1553	0.21	-1.1
1,812,451	-		Pf6N2E2_1553	0.21	+0.8
1,812,451	-		Pf6N2E2_1553	0.21	-0.8
1,812,451	-		Pf6N2E2_1553	0.21	+0.8
1,812,451	-		Pf6N2E2_1553	0.21	+0.8
1,812,451	-		Pf6N2E2_1553	0.21	+0.8
1,812,451	-				-1.4
1,812,706	-		Pf6N2E2_1553	0.62	+0.8
1,812,706	-		Pf6N2E2_1553	0.62	-0.2
1,812,845	+		Pf6N2E2_1553	0.84	-0.2
1,812,951	+				+0.8
1,812,951	+				+0.8
1,812,951	+				-0.2
1,812,952	-				+0.8
1,812,952	-				-0.8
1,812,952	-				+0.8
1,812,952	-				-0.2
1,812,952	-				+0.8
1,812,952	-				-0.2
1,812,952	-				-0.2
1,812,998	+				-0.2
1,813,039	+				+0.8
1,813,039	+				-0.2
1,813,040	-				+0.8
1,813,040	-				+0.8
1,813,040	-				-0.8
1,813,040	-				+0.8
1,813,040	-				+0.8
1,813,084	-				+0.8
1,813,093	+				+0.8
1,813,100	-				+0.8
1,813,536	+		Pf6N2E2_1554	0.20	-0.2
1,813,559	+		Pf6N2E2_1554	0.21	+0.8
1,813,559	+		Pf6N2E2_1554	0.21	+0.8
1,813,560	-		Pf6N2E2_1554	0.21	-0.2
1,813,560	-		Pf6N2E2_1554	0.21	+0.8
1,813,628	+		Pf6N2E2_1554	0.24	-1.0
1,813,628	+		Pf6N2E2_1554	0.24	-0.2
1,813,629	-		Pf6N2E2_1554	0.24	+0.8
1,813,684	+		Pf6N2E2_1554	0.27	-1.5
1,813,684	+		Pf6N2E2_1554	0.27	+0.8
1,813,685	-		Pf6N2E2_1554	0.27	-0.2
1,813,806	-		Pf6N2E2_1554	0.33	+0.8
1,813,806	-		Pf6N2E2_1554	0.33	+0.8