Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1500

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,753,296	+		Pf6N2E2_1499	0.33	+0.8
1,753,379	+		Pf6N2E2_1499	0.43	+0.8
1,753,380	-		Pf6N2E2_1499	0.43	+0.8
1,753,453	+		Pf6N2E2_1499	0.52	-0.5
1,753,479	-		Pf6N2E2_1499	0.55	-0.2
1,753,862	-				-0.2
1,753,947	-				-0.2
1,753,957	+				+0.8
1,754,321	+		Pf6N2E2_1500	0.26	+0.8
1,754,611	+		Pf6N2E2_1500	0.60	+0.8
1,754,612	-		Pf6N2E2_1500	0.60	-0.2
1,754,669	-		Pf6N2E2_1500	0.67	+0.8
1,754,725	+		Pf6N2E2_1500	0.73	-1.2
1,754,866	+		Pf6N2E2_1500	0.90	+0.8
1,754,866	+		Pf6N2E2_1500	0.90	+0.8
1,754,866	+		Pf6N2E2_1500	0.90	+0.8
1,754,866	+		Pf6N2E2_1500	0.90	-0.8
1,754,866	+				+0.8
1,754,866	+		Pf6N2E2_1500	0.90	-0.2
1,754,867	-		Pf6N2E2_1500	0.90	-0.1
1,754,867	-		Pf6N2E2_1500	0.90	+0.3
1,754,889	+				+0.8
1,754,890	-				-0.5
1,754,904	-				+0.8
1,754,918	-				-0.6
1,754,918	-				+0.8
1,754,918	-				+0.8
1,754,979	-				-0.7
1,755,123	+		Pf6N2E2_1501	0.30	+0.8
1,755,123	+		Pf6N2E2_1501	0.30	+0.8
1,755,123	+		Pf6N2E2_1501	0.30	+0.8
1,755,124	-		Pf6N2E2_1501	0.30	+0.8
1,755,355	-		Pf6N2E2_1501	0.82	+0.8
1,755,414	+				-0.2
1,755,414	+				-0.3
1,755,414	+				-0.2
1,755,454	+				-0.8
1,755,454	+				-0.8
1,755,486	+				+0.8
1,755,486	+				-0.6
1,755,486	+				-0.7
1,755,486	+				+0.8
1,755,487	-				+1.4
1,755,715	+		Pf6N2E2_1502	0.45	-0.8
1,755,715	+		Pf6N2E2_1502	0.45	-0.8
1,755,932	+				-0.8
1,755,933	-				-0.3