Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1431

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,679,720	+		Pf6N2E2_1430	0.32	+0.8
1,679,721	-		Pf6N2E2_1430	0.32	-0.8
1,679,957	-		Pf6N2E2_1430	0.50	+0.8
1,680,024	+		Pf6N2E2_1430	0.55	+0.8
1,680,084	+		Pf6N2E2_1430	0.59	+0.8
1,680,085	-		Pf6N2E2_1430	0.59	-0.2
1,680,144	+		Pf6N2E2_1430	0.64	-0.2
1,680,145	-		Pf6N2E2_1430	0.64	+0.8
1,680,148	+		Pf6N2E2_1430	0.64	+0.8
1,680,148	+		Pf6N2E2_1430	0.64	+0.8
1,680,149	-		Pf6N2E2_1430	0.64	-0.9
1,680,149	-		Pf6N2E2_1430	0.64	+0.8
1,680,149	-		Pf6N2E2_1430	0.64	+0.8
1,680,299	-		Pf6N2E2_1430	0.75	+0.8
1,680,363	+		Pf6N2E2_1430	0.80	+0.8
1,680,364	-		Pf6N2E2_1430	0.80	+0.8
1,680,391	-		Pf6N2E2_1430	0.82	-0.1
1,680,391	-		Pf6N2E2_1430	0.82	+0.8
1,680,391	-		Pf6N2E2_1430	0.82	-0.2
1,680,454	-		Pf6N2E2_1430	0.87	-0.2
1,680,454	-		Pf6N2E2_1430	0.87	+0.3
1,680,462	+		Pf6N2E2_1430	0.88	+0.8
1,680,462	+		Pf6N2E2_1430	0.88	-0.8
1,680,463	-		Pf6N2E2_1430	0.88	-0.2
1,680,537	+				-0.4
1,680,537	+				+0.8
1,680,538	-				+0.8
1,680,538	-				-0.3
1,680,538	-				-0.6
1,680,538	-				+0.8
1,680,641	-				-0.8
1,680,641	-				+0.8
1,680,655	-				-1.0
1,681,371	+		Pf6N2E2_1431	0.63	+0.8
1,681,372	-		Pf6N2E2_1431	0.63	-1.8
1,681,492	-		Pf6N2E2_1431	0.74	-0.2
1,681,779	-				-0.2
1,681,895	+		Pf6N2E2_1432	0.13	+0.8
1,681,896	-		Pf6N2E2_1432	0.13	+0.8
1,681,963	-		Pf6N2E2_1432	0.21	-0.2
1,682,351	+		Pf6N2E2_1432	0.65	-0.2
1,682,351	+		Pf6N2E2_1432	0.65	-0.3
1,682,352	-		Pf6N2E2_1432	0.65	-0.4
1,682,573	+				-0.5
1,682,606	+				+0.8
1,682,607	-				-0.8
1,682,607	-				-0.6
1,682,607	-				-0.2
1,682,607	-				+0.8
1,682,607	-				+2.4
1,682,607	-				-0.2
1,682,638	+				+0.8
1,682,638	+				-0.2