Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1211

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,417,485	+		Pf6N2E2_1210	0.54	+0.8
1,417,485	+		Pf6N2E2_1210	0.54	-1.1
1,417,485	+		Pf6N2E2_1210	0.54	+0.8
1,417,485	+		Pf6N2E2_1210	0.54	+0.8
1,417,485	+		Pf6N2E2_1210	0.54	+0.8
1,417,486	-		Pf6N2E2_1210	0.54	-0.2
1,417,692	-		Pf6N2E2_1210	0.72	+0.8
1,417,693	+		Pf6N2E2_1210	0.72	+0.8
1,417,730	+		Pf6N2E2_1210	0.75	+0.4
1,417,730	+		Pf6N2E2_1210	0.75	-0.6
1,417,752	-		Pf6N2E2_1210	0.77	-0.4
1,417,814	+		Pf6N2E2_1210	0.82	+0.8
1,417,815	-		Pf6N2E2_1210	0.82	-0.2
1,418,144	+				+0.8
1,418,145	-				-0.1
1,418,145	-				-0.2
1,418,217	-		Pf6N2E2_1211	0.18	+0.8
1,418,493	-		Pf6N2E2_1211	0.86	-0.1
1,418,533	+				+0.8
1,418,534	-				+0.8
1,418,534	-				+0.8
1,418,534	-				+0.8
1,418,534	-				+0.8
1,418,573	+				+0.8
1,418,574	-				-0.6
1,418,574	-				-1.0
1,418,574	-				+0.5
1,418,580	-				-0.2
1,418,644	-				-0.5
1,418,646	+				-0.2
1,418,646	+				-0.8
1,418,647	-				+2.1
1,418,647	-				-0.2
1,418,834	+		Pf6N2E2_1212	0.12	+0.8
1,418,834	+		Pf6N2E2_1212	0.12	+0.8
1,418,834	+		Pf6N2E2_1212	0.12	+0.8
1,419,095	-		Pf6N2E2_1212	0.42	+0.8
1,419,154	-		Pf6N2E2_1212	0.49	+0.8
1,419,175	+		Pf6N2E2_1212	0.51	-0.2
1,419,175	+		Pf6N2E2_1212	0.51	+0.4
1,419,175	+		Pf6N2E2_1212	0.51	+0.8
1,419,176	-		Pf6N2E2_1212	0.51	+0.8
1,419,305	+		Pf6N2E2_1212	0.66	+0.1
1,419,306	-		Pf6N2E2_1212	0.67	+0.8
1,419,306	-		Pf6N2E2_1212	0.67	-0.2
1,419,512	+				-0.2
1,419,512	+				-0.5
1,419,542	+				-1.5
1,419,542	+				+0.3
1,419,542	+				+0.8
1,419,542	+				-0.2
1,419,542	+				+0.8
1,419,543	-				+0.6
1,419,543	-				-0.2
1,419,543	-				-0.3