Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1203

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,407,927	+		Pf6N2E2_1202	0.81	+0.8
1,408,012	+		Pf6N2E2_1202	0.83	+0.8
1,408,012	+		Pf6N2E2_1202	0.83	+0.8
1,408,012	+		Pf6N2E2_1202	0.83	+0.8
1,408,013	-		Pf6N2E2_1202	0.83	+0.8
1,408,013	-		Pf6N2E2_1202	0.83	-0.1
1,408,013	-		Pf6N2E2_1202	0.83	-1.2
1,408,013	-		Pf6N2E2_1202	0.83	+0.8
1,408,017	-		Pf6N2E2_1202	0.83	-0.8
1,408,112	+		Pf6N2E2_1202	0.85	-0.2
1,408,265	+		Pf6N2E2_1202	0.89	+0.8
1,408,266	-		Pf6N2E2_1202	0.89	+0.8
1,408,290	+		Pf6N2E2_1202	0.90	+0.8
1,408,436	-				-0.2
1,408,436	-				+0.8
1,408,441	+				-0.2
1,408,442	-				+0.8
1,408,703	+				+0.8
1,408,780	+				-0.8
1,408,780	+				-0.8
1,408,788	+				-1.4
1,408,789	-				+0.8
1,408,789	-				-0.2
1,408,790	+				+0.8
1,408,829	-				+0.8
1,409,252	+		Pf6N2E2_1203	0.89	+0.8
1,409,253	-		Pf6N2E2_1203	0.89	+0.8
1,409,253	-		Pf6N2E2_1203	0.89	-1.5
1,409,253	-		Pf6N2E2_1203	0.89	+0.8
1,409,253	-		Pf6N2E2_1203	0.89	-0.2
1,409,253	-		Pf6N2E2_1203	0.89	-0.2
1,409,687	+		Pf6N2E2_1204	0.17	+0.8
1,409,748	-		Pf6N2E2_1204	0.19	+0.8
1,409,748	-		Pf6N2E2_1204	0.19	+0.8
1,410,139	-		Pf6N2E2_1204	0.37	-0.8
1,410,203	+		Pf6N2E2_1204	0.40	+0.8
1,410,204	-		Pf6N2E2_1204	0.40	+1.0