Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1002

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,170,245	+				-0.7
1,170,245	+				+0.8
1,170,246	-				+0.8
1,170,291	+				-0.2
1,170,292	-				+0.8
1,170,330	-				+0.8
1,170,330	-				+0.3
1,170,353	+				-1.2
1,170,402	+		Pf6N2E2_1001	0.12	+0.8
1,170,403	-		Pf6N2E2_1001	0.13	-1.2
1,170,425	+		Pf6N2E2_1001	0.15	+0.8
1,170,587	-		Pf6N2E2_1001	0.34	-0.7
1,170,587	-		Pf6N2E2_1001	0.34	+0.8
1,170,657	+		Pf6N2E2_1001	0.42	-0.5
1,170,658	-		Pf6N2E2_1001	0.42	-1.0
1,170,676	+		Pf6N2E2_1001	0.44	+0.8
1,170,728	+		Pf6N2E2_1001	0.51	+0.8
1,170,728	+		Pf6N2E2_1001	0.51	+0.8
1,170,729	-		Pf6N2E2_1001	0.51	+0.3
1,170,763	+		Pf6N2E2_1001	0.55	+0.8
1,170,776	-		Pf6N2E2_1001	0.56	+0.6
1,170,776	-		Pf6N2E2_1001	0.56	-0.2
1,170,934	+		Pf6N2E2_1001	0.75	+0.8
1,170,935	-		Pf6N2E2_1001	0.75	+0.8
1,170,935	-		Pf6N2E2_1001	0.75	+0.8
1,170,938	+				+0.8
1,171,018	+		Pf6N2E2_1001	0.84	+0.8
1,171,018	+		Pf6N2E2_1001	0.84	+0.8
1,171,021	+		Pf6N2E2_1001	0.85	-0.7
1,171,021	+		Pf6N2E2_1001	0.85	-0.3
1,171,021	+		Pf6N2E2_1001	0.85	-0.3
1,171,028	-		Pf6N2E2_1001	0.86	-1.3
1,171,148	+				+0.8
1,171,148	+				-0.2
1,171,148	+				-0.2
1,171,154	+				+0.8
1,171,154	+				+0.8
1,171,154	+				+0.8
1,171,219	+				+0.1
1,171,239	+				-0.2
1,171,239	+				+0.8
1,171,239	+				-0.4
1,171,239	+				+0.8
1,171,239	+				-1.2
1,171,240	-				-0.2
1,171,240	-				+0.8
1,171,334	+				-0.6
1,171,334	+				-0.7
1,171,335	-				+0.8
1,171,396	+		Pf6N2E2_1002	0.15	+0.8
1,171,396	+		Pf6N2E2_1002	0.15	-0.2
1,171,402	+		Pf6N2E2_1002	0.16	+0.8
1,171,402	+		Pf6N2E2_1002	0.16	+0.8
1,171,403	-		Pf6N2E2_1002	0.16	+0.8
1,171,422	+		Pf6N2E2_1002	0.18	-0.2
1,171,481	+		Pf6N2E2_1002	0.24	-0.2
1,171,509	+		Pf6N2E2_1002	0.27	+0.8
1,171,537	+		Pf6N2E2_1002	0.29	-0.5
1,171,537	+		Pf6N2E2_1002	0.29	+0.8
1,171,758	+		Pf6N2E2_1002	0.51	-0.2
1,171,758	+		Pf6N2E2_1002	0.51	-1.7
1,171,758	+		Pf6N2E2_1002	0.51	-0.2
1,171,758	+		Pf6N2E2_1002	0.51	+0.8
1,171,890	+		Pf6N2E2_1002	0.65	+0.8
1,171,890	+		Pf6N2E2_1002	0.65	+0.8
1,171,937	+		Pf6N2E2_1002	0.69	-1.3
1,171,937	+		Pf6N2E2_1002	0.69	-0.2
1,171,937	+		Pf6N2E2_1002	0.69	+0.8
1,171,937	+		Pf6N2E2_1002	0.69	-0.2
1,171,937	+		Pf6N2E2_1002	0.69	-0.2
1,171,938	-		Pf6N2E2_1002	0.69	+0.8
1,171,938	-		Pf6N2E2_1002	0.69	-0.2
1,171,938	-				+0.8
1,171,938	-		Pf6N2E2_1002	0.69	+0.8
1,171,938	-		Pf6N2E2_1002	0.69	-0.2
1,171,938	-		Pf6N2E2_1002	0.69	-0.9
1,171,938	-		Pf6N2E2_1002	0.69	+0.8
1,171,938	-		Pf6N2E2_1002	0.69	-0.2
1,171,939	+		Pf6N2E2_1002	0.69	+0.8
1,171,939	+		Pf6N2E2_1002	0.69	+0.8
1,171,940	-		Pf6N2E2_1002	0.70	+0.8
1,172,004	+		Pf6N2E2_1002	0.76	+0.8
1,172,005	-		Pf6N2E2_1002	0.76	+0.8
1,172,005	-		Pf6N2E2_1002	0.76	+0.8
1,172,092	+		Pf6N2E2_1002	0.85	-0.2
1,172,092	+		Pf6N2E2_1002	0.85	+0.8
1,172,093	-		Pf6N2E2_1002	0.85	+0.8
1,172,093	-		Pf6N2E2_1002	0.85	+3.2
1,172,133	+		Pf6N2E2_1002	0.89	-0.2
1,172,134	-		Pf6N2E2_1002	0.89	-0.7
1,172,225	+				-0.7
1,172,225	+				+0.8
1,172,225	+				-0.4
1,172,225	+				+0.8
1,172,225	+				-0.6
1,172,226	-				+0.8
1,172,243	-				+0.8
1,172,247	+				-0.6
1,172,248	-				+0.8
1,172,276	-				+0.8
1,172,276	-				-1.2
1,172,330	-				-0.2
1,172,339	+				+0.4
1,172,340	-				+0.8
1,172,444	+				+0.8
1,172,444	+				-1.4
1,172,508	-		Pf6N2E2_1003	0.14	+0.8
1,172,594	+		Pf6N2E2_1003	0.20	-2.0
1,172,594	+		Pf6N2E2_1003	0.20	+0.8
1,172,595	-		Pf6N2E2_1003	0.20	+0.8
1,172,722	+		Pf6N2E2_1003	0.30	-0.3
1,172,723	-		Pf6N2E2_1003	0.30	-0.7
1,172,775	-		Pf6N2E2_1003	0.33	+0.8
1,172,927	-		Pf6N2E2_1003	0.44	+0.8
1,173,009	+		Pf6N2E2_1003	0.50	+0.8
1,173,009	+		Pf6N2E2_1003	0.50	+0.8
1,173,010	-		Pf6N2E2_1003	0.50	-0.2
1,173,010	-		Pf6N2E2_1003	0.50	+0.8
1,173,010	-		Pf6N2E2_1003	0.50	+0.0
1,173,125	-		Pf6N2E2_1003	0.59	+0.8
1,173,125	-		Pf6N2E2_1003	0.59	+0.8
1,173,125	-		Pf6N2E2_1003	0.59	+0.8
1,173,189	+		Pf6N2E2_1003	0.63	-0.3
1,173,189	+		Pf6N2E2_1003	0.63	+0.8
1,173,190	-		Pf6N2E2_1003	0.63	+0.8
1,173,219	+		Pf6N2E2_1003	0.66	-0.2