Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5977

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
6,793,391	+		Pf6N2E2_5975	0.75	-0.7
6,793,744	-		Pf6N2E2_5976	0.15	-0.1
6,793,965	+		Pf6N2E2_5976	0.50	+0.9
6,793,965	+		Pf6N2E2_5976	0.50	+0.9
6,793,966	-		Pf6N2E2_5976	0.50	+0.9
6,794,029	+		Pf6N2E2_5976	0.61	+0.9
6,794,029	+		Pf6N2E2_5976	0.61	+0.9
6,794,029	+		Pf6N2E2_5976	0.61	-1.1
6,794,030	-		Pf6N2E2_5976	0.61	+0.9
6,794,030	-		Pf6N2E2_5976	0.61	+1.9
6,794,030	-		Pf6N2E2_5976	0.61	-0.7
6,794,030	-		Pf6N2E2_5976	0.61	-0.5
6,794,030	-		Pf6N2E2_5976	0.61	-0.1
6,794,130	-		Pf6N2E2_5976	0.77	-0.1
6,794,244	+				+0.9
6,794,244	+				+0.9
6,794,349	+				-0.1
6,794,473	+		Pf6N2E2_5977	0.13	+0.9
6,794,671	+		Pf6N2E2_5977	0.30	-1.7
6,794,671	+		Pf6N2E2_5977	0.30	-0.7
6,794,672	-		Pf6N2E2_5977	0.30	-1.7
6,794,672	-		Pf6N2E2_5977	0.30	+0.9
6,794,930	-		Pf6N2E2_5977	0.53	+0.9
6,794,930	-		Pf6N2E2_5977	0.53	+0.9
6,794,971	+		Pf6N2E2_5977	0.56	+0.9
6,795,073	+		Pf6N2E2_5977	0.65	-1.7
6,795,154	+		Pf6N2E2_5977	0.72	+0.9
6,795,232	+		Pf6N2E2_5977	0.79	-0.1
6,795,233	-		Pf6N2E2_5977	0.79	-0.1
6,795,233	-		Pf6N2E2_5977	0.79	+0.1
6,795,233	-		Pf6N2E2_5977	0.79	-1.4
6,795,271	+		Pf6N2E2_5977	0.83	+0.9
6,795,271	+		Pf6N2E2_5977	0.83	-0.4
6,795,271	+		Pf6N2E2_5977	0.83	+0.9
6,795,272	-		Pf6N2E2_5977	0.83	-1.1
6,795,272	-		Pf6N2E2_5977	0.83	-0.4
6,795,299	-		Pf6N2E2_5977	0.85	+0.9
6,795,299	-		Pf6N2E2_5977	0.85	+0.9
6,795,388	+				-0.7
6,795,388	+				-0.7
6,795,388	+				-0.1
6,795,388	+				-0.5
6,795,388	+				-2.9
6,795,388	+				-0.4
6,795,388	+				-0.1
6,795,388	+				+0.9
6,795,389	-				+0.9
6,795,389	-				-0.1
6,795,389	-				+0.9
6,795,389	-				-0.1
6,795,389	-				-0.1
6,795,389	-				-0.4
6,795,552	+				+0.3
6,795,552	+				+0.9
6,795,552	+				+0.9
6,795,552	+				+0.3
6,795,552	+				+0.9
6,795,552	+				+0.9
6,795,553	-				+0.9
6,795,553	-				+0.9
6,795,553	-				+0.9
6,795,553	-				+0.2
6,795,553	-				+0.9
6,795,553	-				-0.1
6,795,553	-				-0.4
6,795,553	-				-0.6
6,795,556	+				-0.3
6,795,556	+				-1.4
6,795,556	+				+0.9
6,795,556	+				-0.3
6,795,556	+				-0.1
6,795,556	+				+0.9
6,795,556	+				-0.1
6,795,556	+				-0.5
6,795,556	+				-1.0
6,795,556	+				-1.1
6,795,556	+				-0.8
6,795,556	+				-1.7
6,795,556	+				+0.9
6,795,556	+				-0.7
6,795,556	+				+0.9
6,795,557	-				-1.1
6,795,557	-				+0.9
6,795,557	-				-1.0
6,795,557	-				+0.9
6,795,557	-				-1.3
6,795,557	-				+0.9
6,795,557	-				+0.2
6,795,557	-				+0.9
6,795,623	+				-0.5
6,795,624	-				-0.1
6,795,636	-				-1.6
6,795,638	+				-1.2
6,795,638	+				-0.7
6,795,639	-				-1.1
6,795,639	-				+0.9
6,795,639	-				+0.9
6,795,639	-				-0.9
6,795,639	-				-0.1
6,795,644	+				-0.1
6,795,644	+				+0.9
6,795,644	+				-0.9
6,795,644	+				+0.9
6,795,761	+				+0.9
6,795,761	+				-0.1
6,795,762	-				-0.9
6,795,762	-				-1.1
6,795,866	+		Pf6N2E2_5978	0.16	-0.1
6,795,866	+		Pf6N2E2_5978	0.16	-0.9
6,795,867	-		Pf6N2E2_5978	0.16	-0.7
6,795,867	-		Pf6N2E2_5978	0.16	+0.9
6,795,926	+		Pf6N2E2_5978	0.20	-0.1
6,795,927	-		Pf6N2E2_5978	0.20	+0.9
6,795,927	-		Pf6N2E2_5978	0.20	+0.9
6,795,929	-		Pf6N2E2_5978	0.20	+0.9
6,795,929	-		Pf6N2E2_5978	0.20	+0.9
6,795,970	-		Pf6N2E2_5978	0.23	-1.4
6,795,970	-		Pf6N2E2_5978	0.23	+0.9
6,796,109	+		Pf6N2E2_5978	0.34	-0.7
6,796,110	-		Pf6N2E2_5978	0.34	+0.9
6,796,110	-		Pf6N2E2_5978	0.34	+0.9
6,796,217	-		Pf6N2E2_5978	0.42	-2.0
6,796,238	+		Pf6N2E2_5978	0.44	+0.9
6,796,247	+		Pf6N2E2_5978	0.45	+0.9
6,796,248	-		Pf6N2E2_5978	0.45	-0.1
6,796,412	+		Pf6N2E2_5978	0.57	+0.9
6,796,412	+		Pf6N2E2_5978	0.57	-0.1
6,796,412	+		Pf6N2E2_5978	0.57	+0.2
6,796,413	-		Pf6N2E2_5978	0.57	-1.7
6,796,413	-		Pf6N2E2_5978	0.57	+0.9
6,796,413	-		Pf6N2E2_5978	0.57	+0.1
6,796,413	-		Pf6N2E2_5978	0.57	+0.9