Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5634

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
6,448,747	+		Pf6N2E2_5633	0.58	+1.0
6,448,748	-		Pf6N2E2_5633	0.58	-1.7
6,448,748	-		Pf6N2E2_5633	0.58	-0.0
6,448,806	+		Pf6N2E2_5633	0.62	-0.7
6,448,807	-		Pf6N2E2_5633	0.62	+0.0
6,448,846	+		Pf6N2E2_5633	0.65	+1.0
6,448,846	+		Pf6N2E2_5633	0.65	-0.6
6,448,847	-		Pf6N2E2_5633	0.65	+1.0
6,448,861	+		Pf6N2E2_5633	0.66	-0.6
6,448,861	+		Pf6N2E2_5633	0.66	+1.0
6,448,861	+		Pf6N2E2_5633	0.66	-1.3
6,448,861	+		Pf6N2E2_5633	0.66	-0.0
6,448,861	+		Pf6N2E2_5633	0.66	-0.0
6,448,861	+		Pf6N2E2_5633	0.66	-1.1
6,448,861	+		Pf6N2E2_5633	0.66	-0.0
6,448,862	-		Pf6N2E2_5633	0.66	+1.0
6,448,862	-		Pf6N2E2_5633	0.66	-0.6
6,448,862	-		Pf6N2E2_5633	0.66	+1.0
6,448,862	-		Pf6N2E2_5633	0.66	-0.6
6,448,875	+		Pf6N2E2_5633	0.67	+1.0
6,448,875	+		Pf6N2E2_5633	0.67	+1.0
6,448,875	+		Pf6N2E2_5633	0.67	-0.6
6,448,875	+		Pf6N2E2_5633	0.67	+1.0
6,448,876	-		Pf6N2E2_5633	0.67	-0.6
6,448,876	-		Pf6N2E2_5633	0.67	-0.5
6,448,876	-		Pf6N2E2_5633	0.67	-0.6
6,448,876	-		Pf6N2E2_5633	0.67	-0.0
6,448,876	-		Pf6N2E2_5633	0.67	+1.0
6,448,876	-		Pf6N2E2_5633	0.67	+1.0
6,448,876	-		Pf6N2E2_5633	0.67	+1.0
6,448,876	-		Pf6N2E2_5633	0.67	-1.8
6,448,876	-		Pf6N2E2_5633	0.67	-0.0
6,449,002	+		Pf6N2E2_5633	0.76	+1.0
6,449,002	+		Pf6N2E2_5633	0.76	-0.7
6,449,002	+		Pf6N2E2_5633	0.76	+1.0
6,449,002	+		Pf6N2E2_5633	0.76	-0.6
6,449,002	+		Pf6N2E2_5633	0.76	-0.0
6,449,083	+		Pf6N2E2_5633	0.82	+1.0
6,449,083	+		Pf6N2E2_5633	0.82	+0.1
6,449,167	+		Pf6N2E2_5633	0.88	+1.0
6,449,167	+		Pf6N2E2_5633	0.88	-1.6
6,449,167	+		Pf6N2E2_5633	0.88	-0.0
6,449,167	+		Pf6N2E2_5633	0.88	-1.3
6,449,167	+		Pf6N2E2_5633	0.88	-0.8
6,449,167	+		Pf6N2E2_5633	0.88	-0.9
6,449,167	+		Pf6N2E2_5633	0.88	-0.7
6,449,167	+		Pf6N2E2_5633	0.88	+1.0
6,449,168	-		Pf6N2E2_5633	0.88	+1.0
6,449,168	-		Pf6N2E2_5633	0.88	-0.6
6,449,168	-		Pf6N2E2_5633	0.88	+1.0
6,449,168	-		Pf6N2E2_5633	0.88	+1.0
6,449,168	-		Pf6N2E2_5633	0.88	+1.0
6,449,338	+				-0.9
6,449,355	-				+1.0
6,449,355	-				-0.0
6,449,378	+				-0.0
6,449,482	+				-0.0
6,449,483	-				+1.0
6,449,483	-				-0.4
6,449,574	-				-1.2
6,449,832	+		Pf6N2E2_5634	0.37	+1.0
6,449,832	+		Pf6N2E2_5634	0.37	-0.6
6,449,833	-		Pf6N2E2_5634	0.37	-0.0
6,449,833	-		Pf6N2E2_5634	0.37	-0.6
6,449,833	-		Pf6N2E2_5634	0.37	-0.9
6,449,833	-		Pf6N2E2_5634	0.37	-1.3
6,449,871	-		Pf6N2E2_5634	0.46	-0.8
6,449,871	-		Pf6N2E2_5634	0.46	-0.6
6,449,884	+		Pf6N2E2_5634	0.50	+1.0
6,449,884	+		Pf6N2E2_5634	0.50	+1.0
6,449,885	-		Pf6N2E2_5634	0.50	-0.7
6,449,885	-		Pf6N2E2_5634	0.50	-0.0
6,449,885	-		Pf6N2E2_5634	0.50	+1.0
6,449,885	-		Pf6N2E2_5634	0.50	-1.2
6,450,091	-				-1.0
6,450,091	-				+1.0
6,450,091	-				-0.3
6,450,133	-				-0.3
6,450,138	+				+1.0
6,450,138	+				-0.0
6,450,138	+				+1.0
6,450,138	+				+1.0
6,450,138	+				+1.0
6,450,138	+				-0.0
6,450,138	+				+1.0
6,450,139	-				-0.7
6,450,270	+		Pf6N2E2_5635	0.15	-1.3
6,450,271	-		Pf6N2E2_5635	0.15	-0.8
6,450,570	+		Pf6N2E2_5635	0.40	-1.1
6,450,570	+		Pf6N2E2_5635	0.40	+1.0
6,450,571	-		Pf6N2E2_5635	0.40	-0.5
6,450,571	-		Pf6N2E2_5635	0.40	-0.8
6,450,571	-		Pf6N2E2_5635	0.40	+1.0
6,450,573	+		Pf6N2E2_5635	0.40	+1.0
6,450,573	+		Pf6N2E2_5635	0.40	-0.7
6,450,573	+		Pf6N2E2_5635	0.40	-0.0
6,450,574	-		Pf6N2E2_5635	0.40	-0.6
6,450,574	-		Pf6N2E2_5635	0.40	-2.4
6,450,745	+		Pf6N2E2_5635	0.55	+1.0
6,450,745	+		Pf6N2E2_5635	0.55	+1.0
6,450,745	+		Pf6N2E2_5635	0.55	+1.0
6,450,745	+		Pf6N2E2_5635	0.55	+1.0
6,450,746	-		Pf6N2E2_5635	0.55	-0.5
6,450,746	-		Pf6N2E2_5635	0.55	+1.0
6,450,746	-		Pf6N2E2_5635	0.55	-2.8
6,450,746	-		Pf6N2E2_5635	0.55	+1.0
6,450,746	-		Pf6N2E2_5635	0.55	+1.0
6,450,825	+		Pf6N2E2_5635	0.61	-0.0
6,451,069	+		Pf6N2E2_5635	0.82	-0.8