Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4573

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
5,302,218	-				-0.3
5,302,784	+				+1.1
5,302,785	-				+1.1
5,302,785	-				+1.1
5,302,785	-				+1.1
5,302,786	+				-1.2
5,302,786	+				-0.5
5,302,786	+				+1.1
5,302,786	+				-1.1
5,302,787	-				+1.1
5,302,787	-				+1.1
5,302,799	+				+0.1
5,302,800	-				-0.7
5,302,939	+				+0.1
5,302,939	+				+1.1
5,302,940	-				-2.0
5,302,940	-				-0.9
5,302,984	-				-0.1
5,303,003	-				-0.5
5,303,010	+				+1.1
5,303,174	-		Pf6N2E2_4573	0.14	+0.1
5,303,174	-		Pf6N2E2_4573	0.14	-0.4
5,303,225	+		Pf6N2E2_4573	0.17	-0.1
5,303,226	-		Pf6N2E2_4573	0.17	-0.6
5,303,226	-		Pf6N2E2_4573	0.17	-0.3
5,303,330	-		Pf6N2E2_4573	0.24	+1.1
5,303,330	-		Pf6N2E2_4573	0.24	-1.6
5,303,344	+		Pf6N2E2_4573	0.25	-2.2
5,303,494	-		Pf6N2E2_4573	0.34	-0.6
5,303,539	+		Pf6N2E2_4573	0.37	+0.1
5,303,539	+		Pf6N2E2_4573	0.37	+1.1
5,303,539	+		Pf6N2E2_4573	0.37	-0.5
5,303,539	+		Pf6N2E2_4573	0.37	+1.1
5,303,540	-		Pf6N2E2_4573	0.37	+1.1
5,303,540	-		Pf6N2E2_4573	0.37	+0.1
5,303,540	-		Pf6N2E2_4573	0.37	-0.5
5,303,587	+		Pf6N2E2_4573	0.40	+1.1
5,303,587	+		Pf6N2E2_4573	0.40	+1.1
5,303,587	+		Pf6N2E2_4573	0.40	+0.1
5,303,588	-		Pf6N2E2_4573	0.40	+1.1
5,303,588	-		Pf6N2E2_4573	0.40	+1.1
5,303,588	-		Pf6N2E2_4573	0.40	-0.8
5,303,608	+		Pf6N2E2_4573	0.41	-0.9
5,303,608	+		Pf6N2E2_4573	0.41	-0.6
5,303,609	-		Pf6N2E2_4573	0.41	+1.1
5,303,609	-		Pf6N2E2_4573	0.41	-0.7
5,303,609	-		Pf6N2E2_4573	0.41	+1.1
5,303,751	+		Pf6N2E2_4573	0.50	-0.5
5,303,751	+		Pf6N2E2_4573	0.50	-0.5
5,303,751	+		Pf6N2E2_4573	0.50	-0.6
5,303,751	+		Pf6N2E2_4573	0.50	+0.0
5,303,752	-		Pf6N2E2_4573	0.50	+1.1
5,303,752	-		Pf6N2E2_4573	0.50	+1.1
5,303,752	-		Pf6N2E2_4573	0.50	+1.1
5,303,752	-		Pf6N2E2_4573	0.50	+1.1
5,303,752	-		Pf6N2E2_4573	0.50	+0.1
5,303,755	+		Pf6N2E2_4573	0.51	-0.7
5,303,755	+		Pf6N2E2_4573	0.51	+0.1
5,303,755	+		Pf6N2E2_4573	0.51	+1.1
5,303,755	+		Pf6N2E2_4573	0.51	+1.1
5,303,755	+		Pf6N2E2_4573	0.51	+1.1
5,303,755	+		Pf6N2E2_4573	0.51	+1.1
5,303,755	+		Pf6N2E2_4573	0.51	-0.7
5,303,756	-		Pf6N2E2_4573	0.51	+1.1
5,303,756	-		Pf6N2E2_4573	0.51	+0.1
5,303,756	-		Pf6N2E2_4573	0.51	+1.1
5,303,756	-		Pf6N2E2_4573	0.51	-0.3
5,303,756	-		Pf6N2E2_4573	0.51	-0.9
5,303,756	-		Pf6N2E2_4573	0.51	-0.5
5,303,878	+		Pf6N2E2_4573	0.58	+0.1
5,303,991	+		Pf6N2E2_4573	0.65	+0.1
5,303,991	+		Pf6N2E2_4573	0.65	+1.1
5,303,991	+		Pf6N2E2_4573	0.65	+0.1
5,304,020	-		Pf6N2E2_4573	0.67	-0.5
5,304,150	+		Pf6N2E2_4573	0.75	+1.4
5,304,150	+		Pf6N2E2_4573	0.75	-0.7
5,304,150	+		Pf6N2E2_4573	0.75	+1.1
5,304,150	+		Pf6N2E2_4573	0.75	-1.2
5,304,150	+		Pf6N2E2_4573	0.75	-0.2
5,304,150	+		Pf6N2E2_4573	0.75	-0.9
5,304,151	-		Pf6N2E2_4573	0.75	-1.9
5,304,151	-		Pf6N2E2_4573	0.75	+0.1
5,304,151	-		Pf6N2E2_4573	0.75	+0.8
5,304,299	-		Pf6N2E2_4573	0.85	+0.2
5,304,310	+		Pf6N2E2_4573	0.85	-0.0
5,304,311	-		Pf6N2E2_4573	0.85	+0.1
5,304,311	-		Pf6N2E2_4573	0.85	-0.6
5,304,490	+				-0.2
5,304,490	+				+1.1
5,304,490	+				+1.1
5,304,490	+				-0.7
5,304,491	-				+1.1
5,304,491	-				+0.1
5,304,491	-				-0.5
5,304,491	-				+1.1
5,304,491	-				-1.5
5,304,491	-				+0.1
5,304,491	-				-0.5
5,304,491	-				+1.1
5,304,557	+				+0.1
5,304,557	+				-0.5
5,304,557	+				-2.5
5,304,557	+				-0.2
5,304,557	+				+1.1
5,304,557	+				+1.1
5,304,557	+				-0.9
5,304,557	+				+1.1
5,304,557	+				-0.5
5,304,558	-				-0.9
5,304,558	-				-0.6
5,304,558	-				+0.1
5,304,558	-				-0.5
5,304,558	-				-0.8
5,304,560	+				-0.9
5,304,560	+				+1.1
5,304,560	+				+1.1
5,304,560	+				+1.1
5,304,560	+				-0.4
5,304,561	-				+1.1
5,304,561	-				+1.1
5,304,561	-				+0.1
5,304,561	-				-0.8
5,304,563	+				+0.1
5,304,683	-		Pf6N2E2_4574	0.10	+0.0
5,304,716	+		Pf6N2E2_4574	0.16	+0.1
5,304,716	+		Pf6N2E2_4574	0.16	+1.1
5,304,716	+		Pf6N2E2_4574	0.16	+0.1
5,304,716	+		Pf6N2E2_4574	0.16	+0.1
5,304,717	-		Pf6N2E2_4574	0.16	-0.5
5,304,717	-		Pf6N2E2_4574	0.16	+1.1
5,304,717	-		Pf6N2E2_4574	0.16	+0.1
5,304,717	-		Pf6N2E2_4574	0.16	-0.5
5,304,717	-		Pf6N2E2_4574	0.16	+0.1
5,305,152	-				+1.7
5,305,174	-				-0.5
5,305,179	+				+0.1
5,305,179	+				+0.1
5,305,179	+				+1.1
5,305,179	+				-1.0
5,305,255	+				+0.1
5,305,480	+		Pf6N2E2_4575	0.20	-0.8
5,305,481	-		Pf6N2E2_4575	0.20	-0.4
5,305,484	-		Pf6N2E2_4575	0.20	+0.1
5,305,516	+		Pf6N2E2_4575	0.22	+0.5
5,305,516	+		Pf6N2E2_4575	0.22	+1.1
5,305,516	+		Pf6N2E2_4575	0.22	+0.1
5,305,516	+		Pf6N2E2_4575	0.22	+1.1
5,305,516	+		Pf6N2E2_4575	0.22	-0.1
5,305,516	+		Pf6N2E2_4575	0.22	-1.4
5,305,517	-		Pf6N2E2_4575	0.22	-0.9
5,305,517	-		Pf6N2E2_4575	0.22	-0.8
5,305,517	-		Pf6N2E2_4575	0.22	+1.1
5,305,517	-		Pf6N2E2_4575	0.22	-0.4
5,305,517	-		Pf6N2E2_4575	0.22	+0.1
5,305,517	-		Pf6N2E2_4575	0.22	-0.9
5,305,517	-		Pf6N2E2_4575	0.22	+0.1
5,305,517	-		Pf6N2E2_4575	0.22	+0.1