Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4135

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
4,813,955	+		Pf6N2E2_4134	0.18	+0.0
4,813,955	+		Pf6N2E2_4134	0.18	-1.0
4,813,955	+		Pf6N2E2_4134	0.18	-1.5
4,813,956	-		Pf6N2E2_4134	0.18	+1.0
4,814,105	+		Pf6N2E2_4134	0.34	+0.0
4,814,265	+		Pf6N2E2_4134	0.51	+0.0
4,814,410	-		Pf6N2E2_4134	0.66	+1.0
4,814,468	+		Pf6N2E2_4134	0.72	+1.0
4,814,468	+		Pf6N2E2_4134	0.72	-1.3
4,814,468	+		Pf6N2E2_4134	0.72	-0.5
4,814,468	+		Pf6N2E2_4134	0.72	-1.3
4,814,468	+		Pf6N2E2_4134	0.72	+1.0
4,814,468	+		Pf6N2E2_4134	0.72	-0.5
4,814,468	+		Pf6N2E2_4134	0.72	+1.0
4,814,468	+		Pf6N2E2_4134	0.72	-1.1
4,814,468	+		Pf6N2E2_4134	0.72	-0.5
4,814,468	+		Pf6N2E2_4134	0.72	-0.9
4,814,468	+		Pf6N2E2_4134	0.72	+1.0
4,814,468	+		Pf6N2E2_4134	0.72	+0.0
4,814,468	+		Pf6N2E2_4134	0.72	-0.7
4,814,469	-		Pf6N2E2_4134	0.72	+0.0
4,814,469	-		Pf6N2E2_4134	0.72	+1.0
4,814,469	-		Pf6N2E2_4134	0.72	-0.3
4,814,469	-		Pf6N2E2_4134	0.72	+0.0
4,814,469	-		Pf6N2E2_4134	0.72	-0.8
4,814,469	-		Pf6N2E2_4134	0.72	+0.0
4,814,469	-		Pf6N2E2_4134	0.72	+0.0
4,814,469	-		Pf6N2E2_4134	0.72	-0.5
4,814,469	-		Pf6N2E2_4134	0.72	-2.0
4,814,469	-		Pf6N2E2_4134	0.72	+1.0
4,814,475	+		Pf6N2E2_4134	0.73	+0.0
4,814,475	+		Pf6N2E2_4134	0.73	+0.0
4,814,475	+		Pf6N2E2_4134	0.73	+0.0
4,814,475	+		Pf6N2E2_4134	0.73	+1.0
4,814,475	+		Pf6N2E2_4134	0.73	-1.5
4,814,475	+		Pf6N2E2_4134	0.73	+1.0
4,814,475	+		Pf6N2E2_4134	0.73	-1.0
4,814,476	-		Pf6N2E2_4134	0.73	-0.8
4,814,476	-		Pf6N2E2_4134	0.73	-0.4
4,814,476	-		Pf6N2E2_4134	0.73	-0.5
4,814,476	-		Pf6N2E2_4134	0.73	+1.0
4,814,536	+		Pf6N2E2_4134	0.79	+0.0
4,814,536	+		Pf6N2E2_4134	0.79	-0.4
4,814,536	+		Pf6N2E2_4134	0.79	-1.0
4,814,537	-		Pf6N2E2_4134	0.79	+1.0
4,814,541	+		Pf6N2E2_4134	0.80	-0.5
4,814,541	+		Pf6N2E2_4134	0.80	-1.8
4,814,541	+		Pf6N2E2_4134	0.80	-0.2
4,814,541	+		Pf6N2E2_4134	0.80	-1.5
4,814,542	-		Pf6N2E2_4134	0.80	+0.0
4,814,542	-		Pf6N2E2_4134	0.80	+1.0
4,814,542	-		Pf6N2E2_4134	0.80	+1.0
4,814,542	-		Pf6N2E2_4134	0.80	+0.0
4,814,600	+		Pf6N2E2_4134	0.86	-1.2
4,814,600	+		Pf6N2E2_4134	0.86	+0.0
4,814,601	-		Pf6N2E2_4134	0.86	-0.5
4,814,601	-		Pf6N2E2_4134	0.86	-0.5
4,814,603	+		Pf6N2E2_4134	0.86	+0.0
4,814,603	+		Pf6N2E2_4134	0.86	-0.5
4,814,603	+		Pf6N2E2_4134	0.86	-0.8
4,814,603	+		Pf6N2E2_4134	0.86	-1.0
4,814,603	+		Pf6N2E2_4134	0.86	-0.5
4,814,603	+		Pf6N2E2_4134	0.86	-0.5
4,814,603	+		Pf6N2E2_4134	0.86	+1.0
4,814,603	+		Pf6N2E2_4134	0.86	-0.5
4,814,603	+		Pf6N2E2_4134	0.86	-1.0
4,814,604	-		Pf6N2E2_4134	0.87	-0.5
4,814,604	-		Pf6N2E2_4134	0.87	+1.0
4,814,604	-		Pf6N2E2_4134	0.87	+1.0
4,814,604	-		Pf6N2E2_4134	0.87	-0.8
4,814,604	-		Pf6N2E2_4134	0.87	+0.0
4,814,604	-		Pf6N2E2_4134	0.87	+0.0
4,814,604	-		Pf6N2E2_4134	0.87	-1.5
4,814,604	-		Pf6N2E2_4134	0.87	+1.0
4,814,604	-		Pf6N2E2_4134	0.87	-1.3
4,814,604	-		Pf6N2E2_4134	0.87	+1.0
4,814,604	-		Pf6N2E2_4134	0.87	-0.5
4,814,604	-		Pf6N2E2_4134	0.87	-0.4
4,814,604	-		Pf6N2E2_4134	0.87	-0.5
4,814,604	-		Pf6N2E2_4134	0.87	+0.0
4,814,624	-		Pf6N2E2_4134	0.89	-0.8
4,814,624	-		Pf6N2E2_4134	0.89	-1.0
4,814,817	+				-1.5
4,814,817	+				-0.8
4,814,817	+				+1.1
4,814,817	+				-0.0
4,814,817	+				+0.1
4,814,817	+				+1.1
4,814,817	+				-0.5
4,814,817	+				-0.5
4,814,818	-				+1.1
4,814,818	-				+1.1
4,814,942	-		Pf6N2E2_4135	0.19	+1.1
4,814,985	+		Pf6N2E2_4135	0.26	+0.7
4,815,127	+		Pf6N2E2_4135	0.47	-0.5
4,815,128	-		Pf6N2E2_4135	0.47	-1.3
4,815,170	+		Pf6N2E2_4135	0.54	-1.3
4,815,170	+		Pf6N2E2_4135	0.54	+1.1
4,815,170	+		Pf6N2E2_4135	0.54	+0.1
4,815,170	+		Pf6N2E2_4135	0.54	-0.5
4,815,170	+		Pf6N2E2_4135	0.54	+1.1
4,815,171	-		Pf6N2E2_4135	0.54	+0.3
4,815,171	-		Pf6N2E2_4135	0.54	-0.9
4,815,171	-		Pf6N2E2_4135	0.54	-0.9
4,815,171	-		Pf6N2E2_4135	0.54	-1.1
4,815,171	-		Pf6N2E2_4135	0.54	+1.1
4,815,349	+		Pf6N2E2_4135	0.81	+0.1
4,815,349	+		Pf6N2E2_4135	0.81	-0.4
4,815,349	+		Pf6N2E2_4135	0.81	+0.1
4,815,349	+		Pf6N2E2_4135	0.81	+0.1
4,815,350	-		Pf6N2E2_4135	0.81	-0.9
4,815,350	-		Pf6N2E2_4135	0.81	-1.3
4,815,350	-		Pf6N2E2_4135	0.81	-0.9
4,815,435	+				+0.1
4,815,435	+				+1.1
4,815,435	+				+1.1
4,815,436	-				-0.5
4,815,491	+				-0.1
4,815,492	-				+0.1
4,815,504	-				+1.1
4,815,504	-				-0.7
4,815,594	+				+0.1
4,815,594	+				+0.1
4,815,594	+				+0.1
4,815,594	+				+1.1
4,815,595	-		Pf6N2E2_4136	0.10	-1.3
4,815,595	-		Pf6N2E2_4136	0.10	+0.1
4,815,595	-		Pf6N2E2_4136	0.10	+1.1
4,815,738	+		Pf6N2E2_4136	0.52	-0.2
4,815,738	+		Pf6N2E2_4136	0.52	+0.1
4,815,738	+		Pf6N2E2_4136	0.52	-0.5
4,815,738	+		Pf6N2E2_4136	0.52	+1.1
4,815,738	+		Pf6N2E2_4136	0.52	-1.1
4,815,738	+		Pf6N2E2_4136	0.52	-0.5
4,815,738	+		Pf6N2E2_4136	0.52	-0.9
4,815,738	+		Pf6N2E2_4136	0.52	+0.1
4,815,738	+		Pf6N2E2_4136	0.52	+0.1
4,815,738	+		Pf6N2E2_4136	0.52	-0.7
4,815,739	-		Pf6N2E2_4136	0.53	+0.1
4,815,739	-		Pf6N2E2_4136	0.53	+0.1
4,815,889	+				+1.1
4,815,889	+				-0.7
4,815,889	+				-0.7
4,815,889	+				+1.1
4,815,890	-				+1.1
4,815,890	-				+0.1
4,815,890	-				+1.1
4,815,890	-				+1.1
4,816,055	+				+1.1
4,816,055	+				-0.6
4,816,056	-				+0.1
4,816,125	+				+0.5
4,816,125	+				-0.8
4,816,126	-				-1.6
4,816,126	-				+0.1
4,816,126	-				+0.7
4,816,126	-				+0.1
4,816,126	-				+1.1
4,816,126	-				-0.5
4,816,258	-				+0.1
4,816,258	-				+0.1
4,816,258	-				+0.1
4,816,258	-				+1.1
4,816,258	-				+1.1
4,816,258	-				-0.5
4,816,470	-		Pf6N2E2_4138	0.16	+0.0
4,816,470	-		Pf6N2E2_4138	0.16	-0.5