Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3206

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
3,704,107	+		Pf6N2E2_3203	0.81	-1.5
3,704,107	+		Pf6N2E2_3203	0.81	+1.0
3,704,108	-		Pf6N2E2_3203	0.81	+1.0
3,704,108	-		Pf6N2E2_3203	0.81	-1.4
3,704,108	-		Pf6N2E2_3203	0.81	-0.0
3,704,117	+		Pf6N2E2_3203	0.82	-1.3
3,704,178	+		Pf6N2E2_3203	0.89	-0.6
3,704,299	+				-0.0
3,704,299	+				-0.9
3,704,300	-				+1.0
3,704,300	-				-0.0
3,704,300	-				-0.1
3,704,371	+				+1.0
3,704,371	+				-0.0
3,704,371	+				+1.0
3,704,372	-				-1.0
3,704,372	-				-0.6
3,704,372	-				+0.1
3,704,372	-				+1.0
3,704,402	-		Pf6N2E2_3204	0.15	+1.0
3,704,402	-		Pf6N2E2_3204	0.15	+0.4
3,704,854	+		Pf6N2E2_3205	0.75	-0.0
3,704,854	+		Pf6N2E2_3205	0.75	+1.0
3,704,854	+		Pf6N2E2_3205	0.75	+1.0
3,704,855	-		Pf6N2E2_3205	0.75	-0.8
3,704,855	-		Pf6N2E2_3205	0.75	-0.0
3,704,940	+				+0.1
3,704,940	+				+1.0
3,704,941	-				-1.0
3,704,954	+				-1.6
3,704,955	-				-0.0
3,704,955	-				-1.3
3,704,955	-				-0.7
3,704,958	+				+1.0
3,704,958	+				-0.0
3,704,959	-				+1.0
3,704,959	-				-0.5
3,704,967	+				+2.0
3,704,967	+				-0.6
3,705,011	+				+1.0
3,705,011	+				-1.2
3,705,012	-				+1.0
3,705,012	-				-0.0
3,705,012	-				+1.0
3,705,032	+				-0.6
3,705,032	+				-0.0
3,705,033	-				-0.0
3,705,033	-				+1.0
3,705,033	-				-0.6
3,705,033	-				-0.8
3,705,033	-				+1.0
3,705,044	-				+1.0
3,705,075	-		Pf6N2E2_3206	0.16	-1.8
3,705,075	-		Pf6N2E2_3206	0.16	-0.0
3,705,286	+				+1.0
3,705,330	-				+1.0
3,705,330	-				+1.0
3,705,330	-				-0.6
3,705,428	+				-1.0
3,705,428	+				+1.0
3,705,429	-				+1.0
3,705,432	+				+1.0
3,705,432	+				-0.6
3,705,432	+				-0.0
3,705,432	+				+1.0
3,705,432	+				+1.0
3,705,432	+				-0.6
3,705,433	-				+1.0
3,705,433	-				-0.0
3,705,433	-				+1.3
3,705,433	-				+1.0
3,705,433	-				-1.0
3,705,433	-				+1.0
3,705,433	-				+1.0
3,705,433	-				-1.2
3,705,433	-				-0.0
3,705,433	-				+1.0
3,705,433	-				-0.0
3,705,433	-				+1.0
3,705,434	+				-0.6
3,705,473	-				-1.3
3,705,473	-				-0.0
3,705,534	-				+0.2
3,705,534	-				+1.0
3,705,596	+				+1.0
3,705,596	+				+1.0
3,705,597	-				+1.0
3,705,606	-				-0.6
3,705,660	-		Pf6N2E2_3207	0.10	+1.0
3,705,690	-		Pf6N2E2_3207	0.13	-2.1
3,705,690	-		Pf6N2E2_3207	0.13	-0.2
3,705,809	+		Pf6N2E2_3207	0.23	-0.7
3,705,837	-		Pf6N2E2_3207	0.25	-0.9
3,705,926	-		Pf6N2E2_3207	0.33	+1.0
3,705,964	+		Pf6N2E2_3207	0.36	+1.0
3,706,059	-		Pf6N2E2_3207	0.44	+1.0
3,706,074	+		Pf6N2E2_3207	0.45	-1.8
3,706,074	+		Pf6N2E2_3207	0.45	-0.6
3,706,074	+		Pf6N2E2_3207	0.45	+1.0
3,706,074	+		Pf6N2E2_3207	0.45	+1.0
3,706,075	-		Pf6N2E2_3207	0.45	-0.6
3,706,075	-		Pf6N2E2_3207	0.45	+1.0
3,706,075	-		Pf6N2E2_3207	0.45	-0.0
3,706,157	+		Pf6N2E2_3207	0.52	+1.0
3,706,157	+		Pf6N2E2_3207	0.52	-0.6
3,706,158	-		Pf6N2E2_3207	0.52	-0.0