Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2982

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
3,476,434	+		Pf6N2E2_2980	0.66	+1.0
3,476,434	+		Pf6N2E2_2980	0.66	-0.0
3,476,434	+		Pf6N2E2_2980	0.66	+1.0
3,476,435	-		Pf6N2E2_2980	0.66	-0.6
3,476,435	-		Pf6N2E2_2980	0.66	+1.0
3,476,435	-		Pf6N2E2_2980	0.66	-1.0
3,476,435	-		Pf6N2E2_2980	0.66	+1.0
3,476,435	-		Pf6N2E2_2980	0.66	-0.0
3,476,435	-		Pf6N2E2_2980	0.66	+1.0
3,476,435	-		Pf6N2E2_2980	0.66	-1.0
3,476,626	+				-0.6
3,476,627	-				-0.6
3,476,651	-				-0.0
3,476,726	+				-0.6
3,476,726	+				+1.0
3,476,727	-				-0.6
3,476,743	+				-1.4
3,476,743	+				-0.6
3,476,743	+				-0.0
3,476,743	+				-1.4
3,476,743	+				-0.7
3,476,744	-				-0.7
3,476,744	-				-0.0
3,476,828	-		Pf6N2E2_2981	0.26	-1.2
3,476,828	-		Pf6N2E2_2981	0.26	-0.0
3,476,828	-		Pf6N2E2_2981	0.26	+1.0
3,477,103	+		Pf6N2E2_2981	0.85	+1.0
3,477,103	+		Pf6N2E2_2981	0.85	-0.6
3,477,104	-		Pf6N2E2_2981	0.85	+1.0
3,477,341	+				-0.6
3,477,383	+				+1.0
3,477,384	-				-1.4
3,477,384	-				-1.8
3,477,384	-				-0.8
3,477,384	-				+1.0
3,477,597	+		Pf6N2E2_2982	0.31	-0.6
3,477,597	+		Pf6N2E2_2982	0.31	-1.0
3,477,597	+		Pf6N2E2_2982	0.31	+1.0
3,477,598	-		Pf6N2E2_2982	0.32	-2.2
3,477,619	+		Pf6N2E2_2982	0.35	+1.0
3,477,619	+		Pf6N2E2_2982	0.35	-0.0
3,477,773	+		Pf6N2E2_2982	0.57	-0.0
3,477,774	-		Pf6N2E2_2982	0.57	+1.0
3,477,774	-		Pf6N2E2_2982	0.57	-0.0
3,477,782	+		Pf6N2E2_2982	0.58	+1.0
3,477,795	+		Pf6N2E2_2982	0.60	+1.0
3,477,795	+		Pf6N2E2_2982	0.60	-1.0
3,477,796	-		Pf6N2E2_2982	0.60	-1.4
3,477,796	-		Pf6N2E2_2982	0.60	-0.0
3,477,870	+		Pf6N2E2_2982	0.71	-0.0
3,477,870	+		Pf6N2E2_2982	0.71	+1.0
3,477,871	-		Pf6N2E2_2982	0.71	-0.4
3,477,871	-		Pf6N2E2_2982	0.71	-0.6
3,477,967	+		Pf6N2E2_2982	0.84	-0.0
3,477,983	+		Pf6N2E2_2982	0.87	-0.0
3,477,983	+		Pf6N2E2_2982	0.87	+1.0
3,477,984	-		Pf6N2E2_2982	0.87	+1.0
3,477,984	-		Pf6N2E2_2982	0.87	+1.0
3,478,066	+				+1.0
3,478,066	+				-0.6
3,478,185	+				-0.0
3,478,185	+				-0.0
3,478,185	+				+1.0
3,478,185	+				-0.0
3,478,186	-				-1.7
3,478,186	-				+1.0