Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2299

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
2,721,443	+		Pf6N2E2_2298	0.27	+0.9
2,721,443	+		Pf6N2E2_2298	0.27	+0.5
2,721,444	-		Pf6N2E2_2298	0.27	-0.1
2,721,444	-		Pf6N2E2_2298	0.27	+0.9
2,721,485	+		Pf6N2E2_2298	0.30	-0.1
2,721,485	+		Pf6N2E2_2298	0.30	+0.9
2,721,486	-		Pf6N2E2_2298	0.30	-0.1
2,721,492	+		Pf6N2E2_2298	0.30	-0.1
2,721,492	+		Pf6N2E2_2298	0.30	-2.6
2,721,493	-		Pf6N2E2_2298	0.30	-0.1
2,721,493	-		Pf6N2E2_2298	0.30	-0.7
2,721,581	+		Pf6N2E2_2298	0.37	+0.9
2,721,581	+		Pf6N2E2_2298	0.37	+0.9
2,721,581	+		Pf6N2E2_2298	0.37	-0.1
2,721,581	+		Pf6N2E2_2298	0.37	-0.7
2,721,581	+		Pf6N2E2_2298	0.37	-0.1
2,721,581	+		Pf6N2E2_2298	0.37	-0.6
2,721,581	+		Pf6N2E2_2298	0.37	-0.5
2,721,582	-		Pf6N2E2_2298	0.37	+0.9
2,721,582	-		Pf6N2E2_2298	0.37	+0.9
2,721,582	-		Pf6N2E2_2298	0.37	+0.9
2,721,582	-		Pf6N2E2_2298	0.37	-0.1
2,721,582	-		Pf6N2E2_2298	0.37	-0.1
2,721,593	+		Pf6N2E2_2298	0.38	-0.7
2,721,593	+		Pf6N2E2_2298	0.38	-0.9
2,721,593	+		Pf6N2E2_2298	0.38	-0.6
2,721,593	+		Pf6N2E2_2298	0.38	+0.9
2,721,594	-		Pf6N2E2_2298	0.38	+0.9
2,721,708	-		Pf6N2E2_2298	0.46	-0.9
2,721,708	-		Pf6N2E2_2298	0.46	+0.9
2,721,708	-		Pf6N2E2_2298	0.46	-0.1
2,721,920	+		Pf6N2E2_2298	0.62	-0.1
2,722,029	-		Pf6N2E2_2298	0.70	-0.3
2,722,085	+		Pf6N2E2_2298	0.75	-0.1
2,722,085	+		Pf6N2E2_2298	0.75	-0.5
2,722,085	+		Pf6N2E2_2298	0.75	-0.7
2,722,086	-		Pf6N2E2_2298	0.75	+0.9
2,722,086	-		Pf6N2E2_2298	0.75	+0.9
2,722,086	-		Pf6N2E2_2298	0.75	-1.1
2,722,086	-		Pf6N2E2_2298	0.75	+0.3
2,722,086	-		Pf6N2E2_2298	0.75	-0.1
2,722,134	-		Pf6N2E2_2298	0.78	+0.9
2,722,677	-				-0.1
2,722,677	-				-0.1
2,722,926	+				+0.9
2,722,927	-				-0.7
2,722,927	-				+0.9