Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1368

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
1,603,572	+		Pf6N2E2_1367	0.31	-0.6
1,603,580	+		Pf6N2E2_1367	0.31	+0.8
1,603,700	+		Pf6N2E2_1367	0.40	-0.8
1,603,745	+		Pf6N2E2_1367	0.43	+0.8
1,603,746	-		Pf6N2E2_1367	0.43	+0.8
1,603,831	+		Pf6N2E2_1367	0.50	-0.4
1,603,832	-		Pf6N2E2_1367	0.50	+0.8
1,603,847	+		Pf6N2E2_1367	0.51	+0.8
1,603,847	+				+0.8
1,603,848	-		Pf6N2E2_1367	0.51	+0.8
1,603,848	-		Pf6N2E2_1367	0.51	+0.2
1,603,848	-		Pf6N2E2_1367	0.51	-0.5
1,603,886	+		Pf6N2E2_1367	0.54	+0.8
1,603,886	+		Pf6N2E2_1367	0.54	+0.8
1,603,889	+		Pf6N2E2_1367	0.54	+0.8
1,603,960	-		Pf6N2E2_1367	0.59	-0.8
1,604,006	+		Pf6N2E2_1367	0.62	+0.8
1,604,006	+		Pf6N2E2_1367	0.62	+0.8
1,604,129	+		Pf6N2E2_1367	0.71	+0.8
1,604,130	-		Pf6N2E2_1367	0.72	-0.8
1,604,130	-		Pf6N2E2_1367	0.72	-0.2
1,604,130	-		Pf6N2E2_1367	0.72	-0.2
1,604,130	-		Pf6N2E2_1367	0.72	+0.8
1,604,214	+		Pf6N2E2_1367	0.78	+0.8
1,604,238	-		Pf6N2E2_1367	0.79	+0.8
1,604,267	+		Pf6N2E2_1367	0.82	+0.8
1,604,339	+		Pf6N2E2_1367	0.87	+0.8
1,604,362	-		Pf6N2E2_1367	0.89	-0.7
1,604,532	-				-0.2
1,604,534	+				+0.2
1,604,534	+				+0.8
1,604,534	+				+1.1
1,604,534	+				+0.8
1,604,534	+				-0.2
1,604,534	+				+0.8
1,604,534	+				+0.8
1,604,535	-				+0.8
1,604,535	-				+0.8
1,604,552	+				+0.8
1,604,649	-				+0.8
1,604,649	-				-1.6
1,604,678	+				+0.8
1,604,775	+		Pf6N2E2_1368	0.15	+0.8
1,604,865	+		Pf6N2E2_1368	0.20	+0.8
1,604,907	+		Pf6N2E2_1368	0.23	+0.8
1,604,908	-		Pf6N2E2_1368	0.23	-1.8
1,604,908	-		Pf6N2E2_1368	0.23	-1.2
1,604,908	-		Pf6N2E2_1368	0.23	-0.1
1,604,972	+		Pf6N2E2_1368	0.27	-0.2
1,605,417	-		Pf6N2E2_1368	0.54	+0.8
1,605,443	+		Pf6N2E2_1368	0.55	-0.2
1,605,443	+		Pf6N2E2_1368	0.55	+0.8
1,605,443	+		Pf6N2E2_1368	0.55	-0.2
1,605,444	-		Pf6N2E2_1368	0.55	+1.8
1,605,444	-		Pf6N2E2_1368	0.55	+0.4
1,605,488	+		Pf6N2E2_1368	0.58	+0.4
1,605,488	+		Pf6N2E2_1368	0.58	-0.5
1,605,489	-		Pf6N2E2_1368	0.58	-0.2
1,605,489	-		Pf6N2E2_1368	0.58	-3.4
1,605,491	+		Pf6N2E2_1368	0.58	+0.8
1,605,491	+		Pf6N2E2_1368	0.58	+0.8
1,605,491	+		Pf6N2E2_1368	0.58	+0.8
1,605,492	-		Pf6N2E2_1368	0.58	+0.8
1,605,492	-		Pf6N2E2_1368	0.58	+0.8
1,605,492	-		Pf6N2E2_1368	0.58	+0.8
1,605,492	-		Pf6N2E2_1368	0.58	+0.8
1,605,641	+		Pf6N2E2_1368	0.67	+0.8
1,605,659	+		Pf6N2E2_1368	0.68	+1.8
1,605,821	+		Pf6N2E2_1368	0.78	+0.8
1,605,821	+		Pf6N2E2_1368	0.78	+0.8
1,605,821	+		Pf6N2E2_1368	0.78	+1.2
1,605,821	+		Pf6N2E2_1368	0.78	-0.2
1,605,822	-		Pf6N2E2_1368	0.78	+0.8
1,605,822	-		Pf6N2E2_1368	0.78	-0.2
1,605,825	+		Pf6N2E2_1368	0.78	+0.8
1,605,825	+		Pf6N2E2_1368	0.78	+0.8
1,605,825	+		Pf6N2E2_1368	0.78	+0.8
1,605,863	+		Pf6N2E2_1368	0.81	-1.8
1,605,863	+		Pf6N2E2_1368	0.81	+0.8
1,605,864	-		Pf6N2E2_1368	0.81	+0.8
1,605,962	+		Pf6N2E2_1368	0.87	-0.8
1,606,031	+				-1.2
1,606,126	+				+0.8
1,606,196	+				+0.8
1,606,202	+				+1.8
1,606,258	-				+0.8
1,606,277	+				+0.8
1,606,277	+				+0.8
1,606,278	-				-0.2
1,606,379	+		Pf6N2E2_1369	0.14	-1.5
1,606,380	-		Pf6N2E2_1369	0.14	-0.8
1,606,532	+		Pf6N2E2_1369	0.34	-0.2
1,606,533	-		Pf6N2E2_1369	0.34	+0.8
1,606,562	+		Pf6N2E2_1369	0.38	+1.4
1,606,763	+		Pf6N2E2_1369	0.64	+0.8
1,606,763	+		Pf6N2E2_1369	0.64	+0.8
1,606,763	+		Pf6N2E2_1369	0.64	+0.8
1,606,763	+		Pf6N2E2_1369	0.64	+0.8
1,606,763	+		Pf6N2E2_1369	0.64	+0.8
1,606,763	+		Pf6N2E2_1369	0.64	-0.2
1,606,763	+		Pf6N2E2_1369	0.64	-0.2
1,606,764	-		Pf6N2E2_1369	0.64	+0.8
1,606,764	-		Pf6N2E2_1369	0.64	+0.8
1,606,764	-		Pf6N2E2_1369	0.64	+0.8
1,606,764	-		Pf6N2E2_1369	0.64	-0.2
1,606,764	-		Pf6N2E2_1369	0.64	+0.8
1,607,050	+				+0.8
1,607,051	-				+0.8
1,607,053	+				-0.9
1,607,054	-				-0.2
1,607,063	+				-0.2
1,607,096	-				-0.8
1,607,162	+				-0.2
1,607,162	+				+0.8
1,607,163	-				-0.9
1,607,163	-				-1.2