Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5979

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
6,796,109	+		Pf6N2E2_5978	0.34	-0.6
6,796,110	-		Pf6N2E2_5978	0.34	+0.9
6,796,110	-		Pf6N2E2_5978	0.34	+0.9
6,796,217	-		Pf6N2E2_5978	0.42	-1.4
6,796,238	+		Pf6N2E2_5978	0.44	+0.9
6,796,247	+		Pf6N2E2_5978	0.45	+0.9
6,796,248	-		Pf6N2E2_5978	0.45	-0.1
6,796,412	+		Pf6N2E2_5978	0.57	+0.9
6,796,412	+		Pf6N2E2_5978	0.57	-0.1
6,796,412	+		Pf6N2E2_5978	0.57	+0.4
6,796,413	-		Pf6N2E2_5978	0.57	-1.6
6,796,413	-		Pf6N2E2_5978	0.57	+0.9
6,796,413	-		Pf6N2E2_5978	0.57	-0.9
6,796,413	-		Pf6N2E2_5978	0.57	+0.9
6,796,472	+		Pf6N2E2_5978	0.62	+0.9
6,796,472	+		Pf6N2E2_5978	0.62	-1.5
6,796,472	+		Pf6N2E2_5978	0.62	+0.9
6,796,473	-		Pf6N2E2_5978	0.62	+0.9
6,796,484	+		Pf6N2E2_5978	0.63	+0.9
6,796,895	+				-0.1
6,796,895	+				+0.9
6,796,895	+				+0.9
6,796,895	+				-0.8
6,796,895	+				+0.0
6,796,895	+				-0.1
6,796,895	+				+0.5
6,796,895	+				+0.9
6,796,895	+				+0.9
6,796,895	+				+0.9
6,796,895	+				-1.1
6,796,895	+				-0.1
6,796,895	+				+0.9
6,796,895	+				-0.6
6,796,895	+				-0.8
6,796,895	+				-0.6
6,796,896	-				-0.6
6,796,896	-				-0.1
6,796,896	-				+0.9
6,796,896	-				+0.9
6,796,896	-				-0.4
6,796,896	-				-1.1
6,796,896	-				-0.1
6,796,896	-				-0.1
6,796,896	-				+0.9
6,796,896	-				-0.8
6,796,896	-				-0.5
6,796,896	-				+0.9
6,796,896	-				+0.9
6,796,896	-				-0.1
6,796,896	-				-0.1
6,796,896	-				-0.1
6,796,896	-				-1.9
6,796,896	-				-0.6
6,796,896	-				-0.1
6,796,896	-				+0.7
6,796,896	-				+0.9
6,796,896	-				-2.5
6,796,896	-				+0.9
6,796,896	-				-0.1
6,796,896	-				-0.1
6,796,897	+				+0.9
6,796,897	+				-1.4
6,796,897	+				-0.1
6,796,897	+				+0.9
6,796,897	+				+1.0
6,796,897	+				-1.0
6,796,897	+				-0.1
6,796,897	+				-0.1
6,796,897	+				-0.1
6,796,897	+				-0.4
6,796,898	-				+0.9
6,796,898	-				-1.4
6,796,898	-				+0.9
6,796,898	-				-0.1
6,796,898	-				-0.1
6,796,898	-				+0.9
6,796,898	-				-1.2
6,796,898	-				+0.9
6,796,931	+				+0.3
6,796,931	+				+0.9
6,796,931	+				+0.9
6,796,931	+				-0.9
6,796,931	+				-0.5
6,796,931	+				+0.9
6,796,931	+				-0.1
6,796,932	-				-0.3
6,796,932	-				+0.9
6,796,970	+				-0.4
6,796,971	-				+0.9
6,796,971	-				+0.9
6,796,971	-				+0.9
6,796,993	+				-0.1
6,796,993	+				+0.9
6,796,994	-				+0.9
6,796,994	-				+0.9
6,797,072	+				+0.9
6,797,073	-				+0.9
6,797,323	-		Pf6N2E2_5979	0.36	-0.1
6,797,323	-		Pf6N2E2_5979	0.36	-0.1
6,797,323	-		Pf6N2E2_5979	0.36	+0.9
6,797,395	-		Pf6N2E2_5979	0.45	-0.1
6,797,619	+		Pf6N2E2_5979	0.73	+0.9
6,797,619	+		Pf6N2E2_5979	0.73	-0.3
6,797,619	+		Pf6N2E2_5979	0.73	-0.1
6,797,620	-		Pf6N2E2_5979	0.73	+0.9
6,797,620	-		Pf6N2E2_5979	0.73	+0.9
6,797,635	-		Pf6N2E2_5979	0.75	+0.9
6,797,745	+		Pf6N2E2_5979	0.89	-0.5
6,797,745	+		Pf6N2E2_5979	0.89	-0.6
6,797,745	+		Pf6N2E2_5979	0.89	+0.9
6,797,746	-		Pf6N2E2_5979	0.89	-0.6
6,797,879	-				+0.9
6,797,908	+				-0.2
6,797,908	+				-0.6
6,797,909	-				-1.0
6,798,130	+		Pf6N2E2_5980	0.27	-0.1
6,798,131	-		Pf6N2E2_5980	0.28	-2.1
6,798,131	-		Pf6N2E2_5980	0.28	+0.6
6,798,382	+		Pf6N2E2_5980	0.51	-0.1
6,798,400	+		Pf6N2E2_5980	0.53	-0.1
6,798,400	+		Pf6N2E2_5980	0.53	-0.6
6,798,401	-		Pf6N2E2_5980	0.53	+0.9
6,798,515	+		Pf6N2E2_5980	0.64	+0.9
6,798,515	+		Pf6N2E2_5980	0.64	-0.1
6,798,515	+		Pf6N2E2_5980	0.64	+0.1
6,798,515	+		Pf6N2E2_5980	0.64	-0.9
6,798,547	+		Pf6N2E2_5980	0.67	-0.1
6,798,547	+		Pf6N2E2_5980	0.67	+0.9
6,798,569	-		Pf6N2E2_5980	0.69	+0.9
6,798,569	-		Pf6N2E2_5980	0.69	+0.9
6,798,574	+		Pf6N2E2_5980	0.70	+0.9
6,798,574	+		Pf6N2E2_5980	0.70	+0.9
6,798,575	-		Pf6N2E2_5980	0.70	+0.9
6,798,575	-		Pf6N2E2_5980	0.70	-0.5
6,798,575	-		Pf6N2E2_5980	0.70	-0.1
6,798,656	+		Pf6N2E2_5980	0.77	+0.9
6,798,656	+		Pf6N2E2_5980	0.77	-0.1
6,798,656	+		Pf6N2E2_5980	0.77	+0.5
6,798,656	+		Pf6N2E2_5980	0.77	+0.9
6,798,784	+		Pf6N2E2_5980	0.90	+0.9
6,798,785	-		Pf6N2E2_5980	0.90	+0.9