Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5310

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
6,103,518	-		Pf6N2E2_5309	0.25	+1.0
6,103,518	-		Pf6N2E2_5309	0.25	-2.0
6,103,854	+		Pf6N2E2_5309	0.62	-0.3
6,103,855	-		Pf6N2E2_5309	0.62	-0.6
6,103,927	-		Pf6N2E2_5309	0.70	+1.0
6,103,944	+		Pf6N2E2_5309	0.72	+0.0
6,103,944	+		Pf6N2E2_5309	0.72	+1.0
6,103,944	+		Pf6N2E2_5309	0.72	+1.0
6,103,945	-		Pf6N2E2_5309	0.72	+1.0
6,104,025	+		Pf6N2E2_5309	0.81	+0.0
6,104,290	+				+1.0
6,104,291	-				+1.0
6,104,291	-				+0.0
6,104,377	+				+1.0
6,104,377	+				-0.2
6,104,377	+				+1.0
6,104,377	+				-0.6
6,104,378	-				-0.2
6,104,378	-				-0.3
6,104,378	-				-0.6
6,104,560	+		Pf6N2E2_5310	0.19	+0.0
6,104,560	+		Pf6N2E2_5310	0.19	+1.0
6,104,560	+		Pf6N2E2_5310	0.19	+1.0
6,104,561	-		Pf6N2E2_5310	0.19	+1.0
6,104,561	-		Pf6N2E2_5310	0.19	+0.0
6,104,827	+		Pf6N2E2_5310	0.46	-1.3
6,104,827	+		Pf6N2E2_5310	0.46	-1.3
6,104,919	+		Pf6N2E2_5310	0.56	+0.0
6,104,919	+		Pf6N2E2_5310	0.56	+0.2
6,104,919	+		Pf6N2E2_5310	0.56	-0.6
6,104,919	+		Pf6N2E2_5310	0.56	+1.0
6,104,920	-		Pf6N2E2_5310	0.56	-0.6
6,104,920	-		Pf6N2E2_5310	0.56	-0.6
6,104,920	-		Pf6N2E2_5310	0.56	-0.6
6,104,920	-		Pf6N2E2_5310	0.56	+1.0
6,104,920	-		Pf6N2E2_5310	0.56	-1.3
6,104,920	-		Pf6N2E2_5310	0.56	-0.6
6,105,054	+		Pf6N2E2_5310	0.70	+0.7
6,105,054	+		Pf6N2E2_5310	0.70	-1.2
6,105,055	-		Pf6N2E2_5310	0.70	+0.0
6,105,055	-		Pf6N2E2_5310	0.70	+1.0
6,105,055	-		Pf6N2E2_5310	0.70	-0.6
6,105,055	-		Pf6N2E2_5310	0.70	+0.0
6,105,055	-		Pf6N2E2_5310	0.70	+0.0
6,105,097	+		Pf6N2E2_5310	0.74	+1.0
6,105,097	+		Pf6N2E2_5310	0.74	+1.0
6,105,109	+		Pf6N2E2_5310	0.75	+0.0
6,105,109	+		Pf6N2E2_5310	0.75	-1.0
6,105,109	+		Pf6N2E2_5310	0.75	-0.8
6,105,109	+		Pf6N2E2_5310	0.75	+0.0
6,105,109	+		Pf6N2E2_5310	0.75	+0.0
6,105,109	+		Pf6N2E2_5310	0.75	-1.6
6,105,109	+		Pf6N2E2_5310	0.75	-0.4
6,105,109	+		Pf6N2E2_5310	0.75	+0.0
6,105,109	+		Pf6N2E2_5310	0.75	+0.0
6,105,109	+		Pf6N2E2_5310	0.75	+1.0
6,105,110	-		Pf6N2E2_5310	0.76	+1.0
6,105,110	-		Pf6N2E2_5310	0.76	+0.0
6,105,110	-		Pf6N2E2_5310	0.76	+0.0
6,105,110	-		Pf6N2E2_5310	0.76	-1.6
6,105,110	-		Pf6N2E2_5310	0.76	+1.0
6,105,110	-		Pf6N2E2_5310	0.76	-0.1
6,105,110	-		Pf6N2E2_5310	0.76	+0.0
6,105,318	-				+1.0
6,105,333	+				+0.3
6,105,333	+				-0.8
6,105,334	-				+0.0
6,105,334	-				+1.0
6,105,334	-				-0.6
6,105,385	-				+1.0
6,105,422	+				-0.1
6,105,423	-				+0.0
6,105,491	+				+0.0
6,105,491	+				-0.6
6,105,491	+				+1.0
6,105,653	+		Pf6N2E2_5311	0.28	+0.0
6,105,653	+		Pf6N2E2_5311	0.28	+0.0
6,105,653	+		Pf6N2E2_5311	0.28	+0.4
6,105,654	-		Pf6N2E2_5311	0.29	-0.6
6,105,654	-		Pf6N2E2_5311	0.29	+1.0
6,105,654	-		Pf6N2E2_5311	0.29	+1.0
6,105,802	+		Pf6N2E2_5311	0.51	+1.0
6,105,802	+		Pf6N2E2_5311	0.51	-0.8
6,105,802	+		Pf6N2E2_5311	0.51	+1.0
6,105,802	+		Pf6N2E2_5311	0.51	+0.0
6,105,802	+		Pf6N2E2_5311	0.51	-0.5
6,105,803	-		Pf6N2E2_5311	0.51	-0.6
6,105,803	-		Pf6N2E2_5311	0.51	+0.0
6,105,803	-		Pf6N2E2_5311	0.51	+0.0
6,105,890	+		Pf6N2E2_5311	0.64	+1.0
6,105,890	+		Pf6N2E2_5311	0.64	-0.6
6,105,891	-		Pf6N2E2_5311	0.64	-1.2
6,105,891	-		Pf6N2E2_5311	0.64	-0.7
6,105,891	-		Pf6N2E2_5311	0.64	+0.0
6,105,891	-		Pf6N2E2_5311	0.64	-1.1
6,105,920	+		Pf6N2E2_5311	0.68	+0.0
6,105,920	+		Pf6N2E2_5311	0.68	+1.0
6,105,920	+		Pf6N2E2_5311	0.68	+1.0
6,105,920	+		Pf6N2E2_5311	0.68	-0.4
6,105,921	-		Pf6N2E2_5311	0.68	-0.6
6,105,921	-		Pf6N2E2_5311	0.68	+1.0
6,105,969	+		Pf6N2E2_5311	0.76	-1.4
6,105,970	-		Pf6N2E2_5311	0.76	+1.0
6,105,971	+		Pf6N2E2_5311	0.76	-0.6
6,105,971	+		Pf6N2E2_5311	0.76	-0.2
6,105,971	+		Pf6N2E2_5311	0.76	-0.3
6,105,971	+		Pf6N2E2_5311	0.76	+1.0
6,105,971	+		Pf6N2E2_5311	0.76	-0.4
6,105,971	+		Pf6N2E2_5311	0.76	-0.6
6,105,971	+		Pf6N2E2_5311	0.76	-0.6
6,105,971	+		Pf6N2E2_5311	0.76	+1.6
6,105,972	-		Pf6N2E2_5311	0.76	+1.0
6,105,972	-		Pf6N2E2_5311	0.76	+1.0
6,105,972	-		Pf6N2E2_5311	0.76	+1.0
6,106,190	-				+0.0
6,106,190	-				+1.0
6,106,230	+				-0.3
6,106,231	-				-0.9
6,106,231	-				+1.0
6,106,231	-				+1.0
6,106,282	+				-1.5
6,106,282	+				-0.3
6,106,282	+				-0.6