Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4115

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
4,793,353	+				-1.0
4,793,395	-				-2.5
4,793,544	+				+1.0
4,793,691	+				-1.5
4,793,694	-				+0.0
4,793,703	+				-0.5
4,793,731	-				-0.4
4,793,755	-				+1.0
4,793,758	+				+1.0
4,793,758	+				+1.0
4,793,759	-				+1.0
4,793,762	+				-0.5
4,793,794	+				+1.0
4,793,804	+				+0.0
4,793,805	-				-1.0
4,793,929	+				+0.0
4,793,929	+				-0.5
4,793,933	+				+1.0
4,793,947	+				+0.0
4,793,947	+				+1.0
4,793,947	+				-0.9
4,793,959	+				+1.0
4,793,960	-				+1.0
4,793,960	-				-0.5
4,794,016	+				-0.5
4,794,016	+				+0.5
4,794,016	+				-0.5
4,794,016	+				+1.0
4,794,016	+				+0.0
4,794,016	+				-0.8
4,794,017	-				-0.2
4,794,017	-				+1.0
4,794,017	-				+1.0
4,794,017	-				-1.3
4,794,017	-				-0.5
4,794,040	+				-0.4
4,794,040	+				+1.0
4,794,425	+		Pf6N2E2_4115	0.21	+0.0
4,794,425	+		Pf6N2E2_4115	0.21	+0.0
4,794,426	-		Pf6N2E2_4115	0.22	-0.5
4,794,581	+		Pf6N2E2_4115	0.41	-0.6
4,794,581	+		Pf6N2E2_4115	0.41	+0.0
4,794,581	+		Pf6N2E2_4115	0.41	-0.8
4,794,581	+		Pf6N2E2_4115	0.41	-0.5
4,794,581	+		Pf6N2E2_4115	0.41	-0.3
4,794,581	+		Pf6N2E2_4115	0.41	-0.2
4,794,581	+		Pf6N2E2_4115	0.41	-0.8
4,794,581	+		Pf6N2E2_4115	0.41	+1.0
4,794,582	-		Pf6N2E2_4115	0.41	-0.8
4,794,582	-		Pf6N2E2_4115	0.41	+0.0
4,794,582	-		Pf6N2E2_4115	0.41	+1.0
4,794,582	-		Pf6N2E2_4115	0.41	-1.5
4,794,582	-		Pf6N2E2_4115	0.41	-1.0
4,794,582	-		Pf6N2E2_4115	0.41	+1.0
4,794,582	-		Pf6N2E2_4115	0.41	+1.0
4,794,592	-		Pf6N2E2_4115	0.42	+1.0
4,794,707	+		Pf6N2E2_4115	0.56	+0.0
4,794,707	+		Pf6N2E2_4115	0.56	+0.0
4,794,707	+		Pf6N2E2_4115	0.56	+1.0
4,794,708	-		Pf6N2E2_4115	0.57	-1.3
4,794,708	-		Pf6N2E2_4115	0.57	-0.5
4,794,824	+		Pf6N2E2_4115	0.71	-0.7
4,794,824	+		Pf6N2E2_4115	0.71	-1.0
4,795,047	+				+0.8
4,795,081	-				-0.5
4,795,133	+				+0.0
4,795,133	+				+1.0
4,795,133	+				+1.0
4,795,133	+				-1.0
4,795,133	+				+0.0
4,795,133	+				-0.5
4,795,134	-				-0.8
4,795,134	-				+1.0
4,795,134	-				+1.0
4,795,134	-				-0.4
4,795,134	-				+0.0
4,795,134	-				-0.5
4,795,134	-				-1.3
4,795,134	-				-0.5
4,795,134	-				-0.5
4,795,199	+				-0.2
4,795,330	+		Pf6N2E2_4116	0.19	-2.2
4,795,331	-		Pf6N2E2_4116	0.19	-1.3
4,795,331	-		Pf6N2E2_4116	0.19	-1.4
4,795,331	-		Pf6N2E2_4116	0.19	-1.0
4,795,331	-		Pf6N2E2_4116	0.19	+0.0
4,795,374	+		Pf6N2E2_4116	0.26	+0.0
4,795,375	-		Pf6N2E2_4116	0.26	-0.4
4,795,375	-		Pf6N2E2_4116	0.26	-1.0
4,795,555	+		Pf6N2E2_4116	0.54	+1.0
4,795,561	+		Pf6N2E2_4116	0.55	-1.0
4,795,561	+		Pf6N2E2_4116	0.55	-0.9
4,795,561	+		Pf6N2E2_4116	0.55	-0.7
4,795,562	-		Pf6N2E2_4116	0.55	-1.5
4,795,562	-		Pf6N2E2_4116	0.55	-1.0
4,795,562	-		Pf6N2E2_4116	0.55	+0.0
4,795,562	-		Pf6N2E2_4116	0.55	-1.3
4,795,659	+		Pf6N2E2_4116	0.70	+0.0
4,795,868	+				+1.0
4,795,868	+				-0.3
4,795,869	-				+0.2
4,795,869	-				-0.5
4,795,933	+				-0.5
4,795,933	+				-0.8
4,795,933	+				+0.0
4,795,933	+				+0.6
4,795,933	+				+1.0
4,795,933	+				+1.0
4,795,933	+				-0.5
4,795,933	+				+1.0
4,795,933	+				-1.0
4,795,933	+				-1.1
4,795,933	+				-0.4
4,795,934	-				+1.0
4,795,934	-				+1.0
4,795,934	-				+1.0
4,795,934	-				-1.1
4,795,934	-				+0.0
4,795,934	-				-0.2
4,795,934	-				-0.1
4,795,934	-				+0.0
4,795,934	-				+1.0
4,795,934	-				+0.0
4,795,934	-				+1.0
4,795,934	-				-1.3
4,795,943	-				+0.0
4,795,943	-				-0.5
4,795,943	-				+1.4
4,795,943	-				+1.0
4,795,943	-				-0.5
4,795,962	+				+0.0
4,795,995	+				+1.0
4,795,996	-				+1.0
4,796,005	+				+1.0
4,796,006	-				-1.5
4,796,006	-				-0.5
4,796,006	-				-0.3