Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3076

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
3,563,405	+		Pf6N2E2_3075	0.58	+1.0
3,563,405	+		Pf6N2E2_3075	0.58	-0.0
3,563,405	+		Pf6N2E2_3075	0.58	-0.6
3,563,406	-		Pf6N2E2_3075	0.58	-0.0
3,563,406	-		Pf6N2E2_3075	0.58	-0.6
3,563,406	-		Pf6N2E2_3075	0.58	+1.0
3,563,406	-		Pf6N2E2_3075	0.58	-0.0
3,563,406	-		Pf6N2E2_3075	0.58	+1.0
3,563,792	+		Pf6N2E2_3075	0.82	-0.0
3,563,812	-		Pf6N2E2_3075	0.83	+1.0
3,563,812	-		Pf6N2E2_3075	0.83	-1.4
3,564,076	-				+2.0
3,564,077	+				-0.4
3,564,077	+				-1.7
3,564,078	-				+1.0
3,564,078	-				+1.0
3,564,078	-				-0.7
3,564,113	+				-1.4
3,564,113	+				+1.0
3,564,115	+				-0.5
3,564,115	+				-0.6
3,564,115	+				-2.2
3,564,115	+				+1.0
3,564,115	+				-0.4
3,564,115	+				-1.4
3,564,115	+				-1.6
3,564,115	+				+1.0
3,564,115	+				+1.0
3,564,115	+				+1.0
3,564,115	+				-0.0
3,564,115	+				-0.6
3,564,115	+				-0.0
3,564,115	+				-0.0
3,564,115	+				+1.0
3,564,115	+				+1.0
3,564,116	-				-0.0
3,564,116	-				-0.6
3,564,116	-				-0.7
3,564,116	-				+1.0
3,564,116	-				-1.4
3,564,116	-				+1.0
3,564,116	-				+1.0
3,564,116	-				-0.0
3,564,116	-				+1.0
3,564,116	-				-1.0
3,564,116	-				-1.9
3,564,116	-				-0.0
3,564,116	-				+1.0
3,564,116	-				+1.0
3,564,116	-				+1.0
3,564,150	+				+1.0
3,564,153	+				-1.7
3,564,153	+				-0.6
3,564,153	+				+0.6
3,564,153	+				-0.6
3,564,153	+				-0.6
3,564,154	-				-0.0
3,564,154	-				+1.0
3,564,154	-				-0.0
3,564,154	-				-0.7
3,564,154	-				-0.5
3,564,154	-				+0.5
3,564,235	-				-0.6
3,564,275	+				-0.7
3,564,276	-				-0.0
3,564,276	-				-0.6
3,564,528	+		Pf6N2E2_3076	0.19	+1.0
3,564,541	-		Pf6N2E2_3076	0.20	-0.0
3,564,613	-		Pf6N2E2_3076	0.25	-0.0
3,564,624	+		Pf6N2E2_3076	0.26	-0.0
3,564,624	+		Pf6N2E2_3076	0.26	+1.0
3,564,625	-		Pf6N2E2_3076	0.26	+1.0
3,564,628	-		Pf6N2E2_3076	0.26	-1.0
3,564,628	-		Pf6N2E2_3076	0.26	+1.0
3,564,628	-		Pf6N2E2_3076	0.26	+1.0
3,564,628	-		Pf6N2E2_3076	0.26	-1.6
3,564,628	-		Pf6N2E2_3076	0.26	-0.0
3,564,763	+		Pf6N2E2_3076	0.36	-0.0
3,564,763	+		Pf6N2E2_3076	0.36	-0.7
3,564,763	+		Pf6N2E2_3076	0.36	-0.0
3,564,763	+		Pf6N2E2_3076	0.36	-0.1
3,564,763	+		Pf6N2E2_3076	0.36	-0.0
3,564,764	-		Pf6N2E2_3076	0.36	-0.6
3,564,764	-		Pf6N2E2_3076	0.36	-0.6
3,564,770	+		Pf6N2E2_3076	0.37	-0.0
3,564,770	+		Pf6N2E2_3076	0.37	-0.6
3,564,770	+		Pf6N2E2_3076	0.37	+1.0
3,564,771	-		Pf6N2E2_3076	0.37	+1.0
3,564,771	-		Pf6N2E2_3076	0.37	-0.0
3,564,821	+		Pf6N2E2_3076	0.40	+1.0
3,564,821	+		Pf6N2E2_3076	0.40	-0.0
3,564,821	+		Pf6N2E2_3076	0.40	-0.0
3,564,872	+		Pf6N2E2_3076	0.44	-2.5
3,564,910	+		Pf6N2E2_3076	0.47	+1.0
3,564,911	-		Pf6N2E2_3076	0.47	+1.0
3,564,911	-		Pf6N2E2_3076	0.47	-0.0
3,564,911	-		Pf6N2E2_3076	0.47	+1.0
3,564,911	-		Pf6N2E2_3076	0.47	+1.0
3,565,029	+		Pf6N2E2_3076	0.56	-1.4
3,565,029	+		Pf6N2E2_3076	0.56	+1.0
3,565,383	+		Pf6N2E2_3076	0.82	+1.0
3,565,383	+		Pf6N2E2_3076	0.82	+1.0
3,565,383	+		Pf6N2E2_3076	0.82	+1.0
3,565,384	-		Pf6N2E2_3076	0.82	-1.1
3,565,384	-		Pf6N2E2_3076	0.82	+1.0
3,565,435	+		Pf6N2E2_3076	0.86	-0.6
3,565,435	+		Pf6N2E2_3076	0.86	-0.6
3,565,435	+		Pf6N2E2_3076	0.86	+1.0
3,565,436	-		Pf6N2E2_3076	0.86	-1.7
3,565,436	-		Pf6N2E2_3076	0.86	-0.6
3,565,436	-		Pf6N2E2_3076	0.86	+1.0
3,565,436	-		Pf6N2E2_3076	0.86	-1.5
3,565,436	-		Pf6N2E2_3076	0.86	+1.0
3,565,436	-		Pf6N2E2_3076	0.86	+1.0
3,565,436	-		Pf6N2E2_3076	0.86	+1.0
3,565,437	+		Pf6N2E2_3076	0.86	-0.1
3,565,438	-		Pf6N2E2_3076	0.86	+1.0
3,565,666	-				+1.0
3,565,666	-				-0.8
3,565,830	+				-0.0
3,565,899	+		Pf6N2E2_3077	0.25	+1.0
3,565,899	+		Pf6N2E2_3077	0.25	+1.0
3,565,919	+		Pf6N2E2_3077	0.31	+1.0
3,566,150	+				+1.0
3,566,150	+				-1.0
3,566,150	+				-0.6
3,566,150	+				-0.6
3,566,150	+				+1.0
3,566,150	+				-0.6
3,566,150	+				+0.4
3,566,150	+				+1.0
3,566,150	+				+1.0
3,566,150	+				+1.0
3,566,150	+				+1.0
3,566,168	+				-0.0