Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2641

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
3,101,706	-				-0.2
3,101,706	-				-1.0
3,101,706	-				+1.0
3,101,709	+				-0.6
3,101,709	+				+1.0
3,101,709	+				-0.5
3,101,709	+				-1.4
3,101,748	+				-0.0
3,101,748	+				-0.0
3,101,748	+				-0.6
3,101,748	+				+1.0
3,101,749	-				+0.6
3,101,779	+				-1.6
3,101,780	-				-0.6
3,102,506	+		Pf6N2E2_2640	0.83	+0.4
3,102,506	+		Pf6N2E2_2640	0.83	+1.0
3,102,771	+		Pf6N2E2_2641	0.41	-2.8
3,102,771	+		Pf6N2E2_2641	0.41	+1.0
3,102,905	+		Pf6N2E2_2641	0.88	-0.0
3,102,905	+		Pf6N2E2_2641	0.88	-0.6
3,102,905	+		Pf6N2E2_2641	0.88	-1.9
3,102,905	+		Pf6N2E2_2641	0.88	-1.0
3,102,906	-		Pf6N2E2_2641	0.88	-1.8
3,102,906	-		Pf6N2E2_2641	0.88	-0.0
3,102,906	-		Pf6N2E2_2641	0.88	-0.6
3,102,906	-		Pf6N2E2_2641	0.88	-0.6
3,102,906	-		Pf6N2E2_2641	0.88	-0.6
3,102,906	-		Pf6N2E2_2641	0.88	-0.0
3,102,927	+				-0.0
3,102,928	-				+1.0
3,102,972	+				-0.0
3,102,972	+				+1.0
3,102,972	+				-0.0
3,102,973	-				-0.0
3,102,973	-				+1.0
3,102,973	-				+1.0
3,102,974	+				-0.5
3,102,974	+				+1.0
3,102,974	+				-0.6
3,102,974	+				+1.0
3,102,974	+				+1.0
3,102,975	-				-0.0
3,102,975	-				+0.1
3,102,975	-				+1.0
3,102,975	-				+1.0
3,102,975	-				+1.0
3,102,978	-				+1.0
3,103,230	+				-0.6
3,103,230	+				-0.2
3,103,230	+				-0.4
3,103,230	+				-0.4
3,103,230	+				+1.0
3,103,231	-				-0.1
3,103,231	-				-0.6
3,103,231	-				-0.0
3,103,231	-				+1.0
3,103,232	+				+0.2
3,103,232	+				+0.8
3,103,232	+				+1.0
3,103,232	+				-0.0
3,103,232	+				+0.1
3,103,232	+				+1.5
3,103,232	+				-0.3
3,103,232	+				+1.0
3,103,232	+				-0.0
3,103,232	+				+1.0
3,103,233	-				+1.0
3,103,233	-				-0.0
3,103,233	-				+1.0
3,103,233	-				-0.0
3,103,233	-				-1.0
3,103,244	+				-0.0
3,103,245	-				+0.2
3,103,245	-				-0.0
3,103,245	-				-0.0
3,103,245	-				-1.0
3,103,326	+		Pf6N2E2_2642	0.13	+1.0
3,103,326	+		Pf6N2E2_2642	0.13	-1.8
3,103,327	-		Pf6N2E2_2642	0.13	-2.9
3,103,477	+		Pf6N2E2_2642	0.20	+1.0
3,103,477	+		Pf6N2E2_2642	0.20	+1.0
3,103,478	-		Pf6N2E2_2642	0.20	-0.6
3,103,478	-		Pf6N2E2_2642	0.20	+0.4
3,103,478	-		Pf6N2E2_2642	0.20	-0.0
3,103,478	-		Pf6N2E2_2642	0.20	+1.0
3,103,478	-		Pf6N2E2_2642	0.20	-0.0