Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5921

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
6,739,722	+		Pf6N2E2_5920	0.70	-0.1
6,739,723	-		Pf6N2E2_5920	0.70	-0.6
6,739,789	-		Pf6N2E2_5920	0.75	-1.1
6,740,064	+				+0.9
6,740,064	+				+0.9
6,740,078	+				+0.9
6,740,078	+				-0.1
6,740,078	+				-0.1
6,740,079	-				-0.6
6,740,079	-				+0.9
6,740,079	-				-0.6
6,740,120	+				-0.3
6,740,121	-				+0.9
6,740,130	+				-1.1
6,740,130	+				-0.6
6,740,131	-				+0.9
6,740,131	-				-0.1
6,740,131	-				-0.1
6,740,148	+				+0.9
6,740,148	+				-1.1
6,740,148	+				+0.9
6,740,148	+				-0.1
6,740,148	+				+0.9
6,740,149	-				+0.9
6,740,149	-				-0.2
6,740,381	+				+0.9
6,740,382	-				-0.1
6,740,426	+				-0.7
6,740,582	+				+0.9
6,740,583	-				-1.0
6,740,583	-				-0.7
6,740,596	+				-1.4
6,740,596	+				-0.1
6,740,597	-				-0.6
6,740,597	-				-1.1
6,740,597	-				+0.5
6,740,679	-		Pf6N2E2_5921	0.18	-1.1
6,740,825	-		Pf6N2E2_5921	0.41	-1.3
6,740,825	-		Pf6N2E2_5921	0.41	-0.1
6,740,990	+		Pf6N2E2_5921	0.67	+0.9
6,740,990	+		Pf6N2E2_5921	0.67	-0.6
6,740,990	+		Pf6N2E2_5921	0.67	+0.9
6,740,991	-		Pf6N2E2_5921	0.67	+0.9
6,740,991	-		Pf6N2E2_5921	0.67	-1.4
6,741,025	+		Pf6N2E2_5921	0.73	-0.1
6,741,025	+		Pf6N2E2_5921	0.73	+0.9
6,741,025	+		Pf6N2E2_5921	0.73	-0.6
6,741,202	+				+0.1
6,741,229	+				+0.9
6,741,230	-				-0.1
6,741,231	+				-0.6
6,741,231	+				-0.5
6,741,231	+				-0.1
6,741,231	+				+0.9
6,741,231	+				+0.9
6,741,231	+				+0.8
6,741,231	+				-0.1
6,741,231	+				-1.1
6,741,231	+				+0.9
6,741,231	+				+0.9
6,741,231	+				+0.2
6,741,232	-				-1.4
6,741,232	-				-0.1
6,741,232	-				-0.6
6,741,232	-				-1.4
6,741,232	-				-0.1
6,741,232	-				+0.9
6,741,232	-				+0.9
6,741,300	-				-0.1
6,741,300	-				+0.9
6,741,411	+		Pf6N2E2_5922	0.13	+0.9
6,741,411	+		Pf6N2E2_5922	0.13	+0.4
6,741,597	-		Pf6N2E2_5922	0.31	-0.1
6,741,814	+		Pf6N2E2_5922	0.53	-1.4
6,741,815	-		Pf6N2E2_5922	0.53	-1.8
6,741,815	-		Pf6N2E2_5922	0.53	+0.9
6,741,831	+		Pf6N2E2_5922	0.55	-0.6
6,741,831	+		Pf6N2E2_5922	0.55	+0.9
6,741,832	-		Pf6N2E2_5922	0.55	-1.6
6,741,874	+		Pf6N2E2_5922	0.59	+0.9
6,741,875	-		Pf6N2E2_5922	0.59	+0.9
6,741,875	-		Pf6N2E2_5922	0.59	+0.9
6,742,025	-		Pf6N2E2_5922	0.74	-1.4
6,742,071	-		Pf6N2E2_5922	0.79	+0.9
6,742,071	-		Pf6N2E2_5922	0.79	-0.8
6,742,138	+		Pf6N2E2_5922	0.85	+0.6