Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4027

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
4,697,955	+		Pf6N2E2_4025	0.64	-0.0
4,697,956	-		Pf6N2E2_4025	0.64	+0.8
4,698,194	+				+0.4
4,698,194	+				-1.3
4,698,194	+				+1.0
4,698,195	-				-0.0
4,698,195	-				-0.0
4,698,195	-				-0.9
4,698,200	-				-0.0
4,698,307	-		Pf6N2E2_4026	0.24	-0.2
4,698,349	-		Pf6N2E2_4026	0.31	-0.0
4,698,349	-		Pf6N2E2_4026	0.31	-0.0
4,698,349	-		Pf6N2E2_4026	0.31	-0.6
4,698,373	+		Pf6N2E2_4026	0.36	-0.0
4,698,373	+		Pf6N2E2_4026	0.36	-1.5
4,698,374	-		Pf6N2E2_4026	0.36	-1.0
4,698,374	-		Pf6N2E2_4026	0.36	-0.7
4,698,510	+		Pf6N2E2_4026	0.60	-1.0
4,698,644	-		Pf6N2E2_4026	0.84	-0.5
4,698,644	-		Pf6N2E2_4026	0.84	+1.0
4,698,734	-				+1.0
4,698,779	+				+1.0
4,698,779	+				-0.5
4,698,779	+				+1.0
4,698,779	+				-0.5
4,698,779	+				+1.0
4,698,779	+				-0.6
4,698,779	+				-0.0
4,698,779	+				-0.0
4,698,779	+				-0.6
4,698,779	+				-0.6
4,698,780	-				-1.2
4,698,780	-				-0.0
4,698,780	-				-2.0
4,698,780	-				-0.0
4,698,780	-				-0.5
4,698,780	-				+0.2
4,698,780	-				-0.8
4,698,780	-				-0.6
4,698,781	+				-0.0
4,698,814	+				+0.1
4,698,814	+				+1.0
4,698,814	+				-1.0
4,698,814	+				-0.8
4,698,814	+				-0.6
4,698,814	+				-0.6
4,698,815	-				-0.8
4,698,815	-				+0.5
4,698,815	-				-2.3
4,699,136	-		Pf6N2E2_4027	0.17	-0.5
4,699,357	+		Pf6N2E2_4027	0.32	-1.0
4,699,357	+		Pf6N2E2_4027	0.32	-1.4
4,699,357	+		Pf6N2E2_4027	0.32	-0.0
4,699,357	+		Pf6N2E2_4027	0.32	-0.0
4,699,357	+		Pf6N2E2_4027	0.32	+0.6
4,699,357	+		Pf6N2E2_4027	0.32	-1.3
4,699,357	+		Pf6N2E2_4027	0.32	-1.0
4,699,357	+		Pf6N2E2_4027	0.32	-0.2
4,699,357	+		Pf6N2E2_4027	0.32	-0.4
4,699,357	+		Pf6N2E2_4027	0.32	+1.0
4,699,357	+		Pf6N2E2_4027	0.32	-0.4
4,699,357	+		Pf6N2E2_4027	0.32	+1.0
4,699,358	-		Pf6N2E2_4027	0.32	-0.0
4,699,358	-		Pf6N2E2_4027	0.32	-0.6
4,699,358	-		Pf6N2E2_4027	0.32	+1.0
4,699,358	-		Pf6N2E2_4027	0.32	-0.0
4,699,358	-		Pf6N2E2_4027	0.32	-0.2
4,699,358	-		Pf6N2E2_4027	0.32	-0.0
4,699,358	-		Pf6N2E2_4027	0.32	+1.0
4,699,358	-		Pf6N2E2_4027	0.32	+1.0
4,699,358	-		Pf6N2E2_4027	0.32	-0.0
4,699,358	-		Pf6N2E2_4027	0.32	+1.0
4,699,358	-		Pf6N2E2_4027	0.32	-0.8
4,699,358	-		Pf6N2E2_4027	0.32	-0.6
4,699,358	-		Pf6N2E2_4027	0.32	-0.0
4,699,358	-		Pf6N2E2_4027	0.32	-0.6
4,699,358	-		Pf6N2E2_4027	0.32	+1.0
4,699,358	-		Pf6N2E2_4027	0.32	+1.0
4,699,414	+		Pf6N2E2_4027	0.35	+1.0
4,699,414	+		Pf6N2E2_4027	0.35	-0.0
4,699,414	+		Pf6N2E2_4027	0.35	+0.6
4,699,414	+		Pf6N2E2_4027	0.35	-0.0
4,699,415	-		Pf6N2E2_4027	0.35	-0.6
4,699,415	-		Pf6N2E2_4027	0.35	+1.0
4,699,415	-		Pf6N2E2_4027	0.35	+1.0
4,699,513	+		Pf6N2E2_4027	0.42	-0.0
4,699,514	-		Pf6N2E2_4027	0.42	-0.6
4,699,819	+		Pf6N2E2_4027	0.62	-2.0
4,699,820	-		Pf6N2E2_4027	0.62	-0.0
4,700,021	+		Pf6N2E2_4027	0.75	-0.0
4,700,147	-		Pf6N2E2_4027	0.83	-0.0
4,700,173	+		Pf6N2E2_4027	0.85	+1.0
4,700,173	+		Pf6N2E2_4027	0.85	+1.0
4,700,173	+		Pf6N2E2_4027	0.85	+1.0
4,700,173	+		Pf6N2E2_4027	0.85	-0.6
4,700,173	+		Pf6N2E2_4027	0.85	+0.4
4,700,174	-		Pf6N2E2_4027	0.85	-1.3
4,700,174	-		Pf6N2E2_4027	0.85	+1.0
4,700,191	+		Pf6N2E2_4027	0.86	+1.0
4,700,192	-		Pf6N2E2_4027	0.86	-0.7
4,700,197	+		Pf6N2E2_4027	0.86	-0.0
4,700,197	+		Pf6N2E2_4027	0.86	-1.6
4,700,197	+		Pf6N2E2_4027	0.86	-1.0
4,700,197	+		Pf6N2E2_4027	0.86	-2.6
4,700,197	+		Pf6N2E2_4027	0.86	-0.0
4,700,198	-		Pf6N2E2_4027	0.86	+1.0
4,700,198	-		Pf6N2E2_4027	0.86	-1.3
4,700,198	-		Pf6N2E2_4027	0.86	-0.6
4,700,262	+				+1.0
4,700,262	+				+0.6
4,700,262	+				-0.6
4,700,262	+				+1.0
4,700,263	-				+1.0
4,700,404	+				-0.0
4,700,404	+				+1.0
4,700,404	+				-0.3
4,700,404	+				-0.6
4,700,405	-				-1.0
4,700,405	-				-0.0
4,700,480	+				-0.0
4,700,480	+				+1.0
4,700,481	-				-1.0
4,700,481	-				-0.4
4,700,481	-				-0.0
4,700,614	+		Pf6N2E2_4028	0.28	-1.1
4,700,614	+		Pf6N2E2_4028	0.28	+1.2
4,700,614	+		Pf6N2E2_4028	0.28	+1.0
4,700,614	+		Pf6N2E2_4028	0.28	-0.4
4,700,614	+		Pf6N2E2_4028	0.28	-0.6
4,700,614	+		Pf6N2E2_4028	0.28	+1.0
4,700,615	-		Pf6N2E2_4028	0.28	-0.3
4,700,615	-		Pf6N2E2_4028	0.28	-0.6
4,700,615	-		Pf6N2E2_4028	0.28	-0.6
4,700,615	-		Pf6N2E2_4028	0.28	-0.0
4,700,615	-		Pf6N2E2_4028	0.28	-0.6
4,700,737	+		Pf6N2E2_4028	0.52	+0.2
4,700,799	+		Pf6N2E2_4028	0.64	+0.4
4,700,799	+		Pf6N2E2_4028	0.64	-1.3
4,700,800	-		Pf6N2E2_4028	0.64	-0.0
4,700,800	-		Pf6N2E2_4028	0.64	-1.8
4,700,800	-		Pf6N2E2_4028	0.64	-0.0
4,700,895	+		Pf6N2E2_4028	0.83	-0.0
4,700,895	+		Pf6N2E2_4028	0.83	-1.1
4,700,896	-		Pf6N2E2_4028	0.83	+1.0
4,700,896	-		Pf6N2E2_4028	0.83	+1.0
4,700,896	-		Pf6N2E2_4028	0.83	-0.6
4,700,896	-		Pf6N2E2_4028	0.83	-1.0
4,700,896	-		Pf6N2E2_4028	0.83	-0.7
4,700,896	-		Pf6N2E2_4028	0.83	-1.0
4,700,896	-		Pf6N2E2_4028	0.83	+1.0
4,700,896	-		Pf6N2E2_4028	0.83	-0.0
4,700,896	-		Pf6N2E2_4028	0.83	+0.1
4,700,896	-		Pf6N2E2_4028	0.83	-0.6
4,700,918	+		Pf6N2E2_4028	0.88	-0.0
4,700,919	-		Pf6N2E2_4028	0.88	+0.4
4,700,919	-		Pf6N2E2_4028	0.88	-0.0
4,700,919	-		Pf6N2E2_4028	0.88	-0.0
4,700,972	-				-0.1
4,701,068	-				-1.0
4,701,068	-				-0.0
4,701,068	-				-1.6
4,701,356	+		Pf6N2E2_4029	0.28	-0.6
4,701,380	+		Pf6N2E2_4029	0.30	-3.0