Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3853

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
4,486,071	+				+1.0
4,486,071	+				+1.0
4,486,072	-				-0.0
4,486,155	-				-0.0
4,486,155	-				-0.6
4,486,309	+		Pf6N2E2_3853	0.21	-0.6
4,486,310	-		Pf6N2E2_3853	0.21	-1.0
4,486,348	+		Pf6N2E2_3853	0.30	-1.0
4,486,348	+		Pf6N2E2_3853	0.30	+1.0
4,486,349	-		Pf6N2E2_3853	0.30	-0.0
4,486,349	-		Pf6N2E2_3853	0.30	+1.0
4,486,349	-		Pf6N2E2_3853	0.30	+1.0
4,486,413	+		Pf6N2E2_3853	0.44	-0.6
4,486,414	-		Pf6N2E2_3853	0.44	-0.6
4,486,774	+		Pf6N2E2_3854	0.23	+1.0
4,486,774	+		Pf6N2E2_3854	0.23	+0.5
4,486,775	-		Pf6N2E2_3854	0.23	-0.0
4,486,775	-		Pf6N2E2_3854	0.23	-1.0
4,486,775	-		Pf6N2E2_3854	0.23	-0.6
4,486,879	+		Pf6N2E2_3854	0.46	-0.7
4,486,879	+		Pf6N2E2_3854	0.46	-1.0
4,486,879	+		Pf6N2E2_3854	0.46	+1.0
4,486,880	-		Pf6N2E2_3854	0.46	-1.9
4,486,880	-		Pf6N2E2_3854	0.46	+1.0
4,486,880	-		Pf6N2E2_3854	0.46	+0.7
4,486,880	-		Pf6N2E2_3854	0.46	+0.2
4,486,921	+		Pf6N2E2_3854	0.56	-0.0
4,486,921	+		Pf6N2E2_3854	0.56	+1.0
4,486,921	+		Pf6N2E2_3854	0.56	-0.6
4,486,922	-		Pf6N2E2_3854	0.56	+1.0
4,486,922	-		Pf6N2E2_3854	0.56	-0.9
4,486,978	+		Pf6N2E2_3854	0.68	-1.7
4,486,978	+		Pf6N2E2_3854	0.68	-0.6
4,486,978	+		Pf6N2E2_3854	0.68	-0.0
4,486,978	+		Pf6N2E2_3854	0.68	-1.0
4,486,978	+		Pf6N2E2_3854	0.68	-1.2
4,486,978	+		Pf6N2E2_3854	0.68	+1.0
4,486,978	+		Pf6N2E2_3854	0.68	-1.4
4,486,978	+		Pf6N2E2_3854	0.68	+1.0
4,486,979	-		Pf6N2E2_3854	0.68	-0.0
4,486,979	-		Pf6N2E2_3854	0.68	-1.4
4,486,979	-		Pf6N2E2_3854	0.68	+1.0
4,486,979	-		Pf6N2E2_3854	0.68	-0.0
4,487,105	-				+1.0
4,487,105	-				-0.9
4,487,105	-				-0.0
4,487,111	+				-0.1
4,487,111	+				-0.6
4,487,112	-				-0.2
4,487,112	-				+1.0
4,487,112	-				-0.2
4,487,112	-				-0.4
4,487,112	-				+1.0
4,487,136	+				+1.0
4,487,137	-				+0.0
4,487,174	+				-0.0
4,487,188	+				-0.2
4,487,189	-				-0.0
4,487,189	-				+1.0
4,487,194	+				-0.9
4,487,194	+				-0.4
4,487,194	+				+1.0
4,487,194	+				+1.0
4,487,194	+				-0.9
4,487,195	-				-0.6
4,487,195	-				-0.0
4,487,195	-				-0.6
4,487,195	-				+1.0
4,487,195	-				-0.0
4,487,328	-				+2.5
4,487,413	-				+0.1
4,487,452	+				-0.3
4,487,452	+				-0.3
4,487,452	+				-0.9
4,487,453	-				+1.0
4,487,453	-				-1.3
4,487,453	-				-0.6
4,487,453	-				-0.0
4,487,500	+				+1.0
4,487,500	+				-0.0
4,487,500	+				+1.0
4,487,500	+				-0.0
4,487,501	-				-0.6
4,487,501	-				+1.0
4,487,501	-				+1.0
4,487,501	-				-0.0
4,487,501	-				+1.0
4,487,501	-				+1.0
4,487,501	-				-0.0