Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3728

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
4,340,491	+		Pf6N2E2_3726	0.63	+1.0
4,340,491	+		Pf6N2E2_3726	0.63	+1.0
4,340,492	-		Pf6N2E2_3726	0.63	-0.4
4,340,583	-		Pf6N2E2_3726	0.70	+0.0
4,340,761	+		Pf6N2E2_3726	0.85	+0.6
4,341,338	+		Pf6N2E2_3727	0.86	-0.6
4,341,339	-		Pf6N2E2_3727	0.86	+0.6
4,341,339	-		Pf6N2E2_3727	0.86	+0.0
4,341,364	+				-1.3
4,341,639	+		Pf6N2E2_3728	0.33	+0.0
4,341,639	+		Pf6N2E2_3728	0.33	+1.0
4,341,640	-		Pf6N2E2_3728	0.33	+0.0
4,341,640	-		Pf6N2E2_3728	0.33	+1.0
4,341,640	-		Pf6N2E2_3728	0.33	+0.2
4,341,643	-		Pf6N2E2_3728	0.33	-1.3
4,341,744	+		Pf6N2E2_3728	0.47	-1.0
4,341,745	-		Pf6N2E2_3728	0.47	-0.9
4,341,745	-		Pf6N2E2_3728	0.47	-0.3
4,341,855	+		Pf6N2E2_3728	0.63	-0.6
4,341,855	+		Pf6N2E2_3728	0.63	+0.4
4,341,855	+		Pf6N2E2_3728	0.63	+1.0
4,341,855	+		Pf6N2E2_3728	0.63	+1.0
4,341,855	+		Pf6N2E2_3728	0.63	-0.6
4,341,856	-		Pf6N2E2_3728	0.63	-0.8
4,341,856	-		Pf6N2E2_3728	0.63	+0.0
4,341,856	-		Pf6N2E2_3728	0.63	+0.0
4,341,856	-		Pf6N2E2_3728	0.63	-1.0
4,341,856	-		Pf6N2E2_3728	0.63	+0.0
4,341,856	-		Pf6N2E2_3728	0.63	+0.0
4,342,083	+				+0.0
4,342,084	-				+1.0
4,342,529	+		Pf6N2E2_3729	0.33	+1.0
4,342,649	+		Pf6N2E2_3729	0.43	+0.0
4,342,650	-		Pf6N2E2_3729	0.43	+0.0
4,342,742	+		Pf6N2E2_3729	0.50	+0.0
4,343,016	-		Pf6N2E2_3729	0.72	-0.3
4,343,016	-		Pf6N2E2_3729	0.72	+0.0
4,343,016	-		Pf6N2E2_3729	0.72	+0.0