Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2661

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
3,133,101	+		Pf6N2E2_2660	0.27	+1.0
3,133,101	+		Pf6N2E2_2660	0.27	-0.0
3,133,102	-		Pf6N2E2_2660	0.27	+1.0
3,133,102	-		Pf6N2E2_2660	0.27	-0.6
3,133,262	+		Pf6N2E2_2660	0.45	-0.0
3,133,263	-		Pf6N2E2_2660	0.45	+1.0
3,133,422	+		Pf6N2E2_2660	0.63	-0.4
3,133,423	-		Pf6N2E2_2660	0.63	+1.3
3,133,423	-		Pf6N2E2_2660	0.63	-0.0
3,133,464	+		Pf6N2E2_2660	0.68	+1.0
3,133,464	+		Pf6N2E2_2660	0.68	+1.0
3,133,464	+		Pf6N2E2_2660	0.68	+1.0
3,133,464	+		Pf6N2E2_2660	0.68	-0.0
3,133,464	+		Pf6N2E2_2660	0.68	-0.0
3,133,464	+		Pf6N2E2_2660	0.68	-0.0
3,133,465	-		Pf6N2E2_2660	0.68	+1.0
3,133,465	-		Pf6N2E2_2660	0.68	+1.0
3,133,465	-		Pf6N2E2_2660	0.68	+0.1
3,133,465	-		Pf6N2E2_2660	0.68	-1.0
3,133,465	-		Pf6N2E2_2660	0.68	-0.0
3,133,465	-		Pf6N2E2_2660	0.68	+1.0
3,133,465	-		Pf6N2E2_2660	0.68	+1.0
3,133,465	-		Pf6N2E2_2660	0.68	-0.6
3,133,555	-		Pf6N2E2_2660	0.78	+1.0
3,133,819	-				+1.0
3,133,867	+				-0.0
3,133,868	-				+0.5
3,133,868	-				-0.7
3,133,942	+				+0.9
3,133,942	+				-0.1
3,133,943	-				-0.1
3,133,943	-				-0.1
3,133,943	-				+0.2
3,133,943	-				-0.3
3,134,007	+		Pf6N2E2_2661	0.13	-0.4
3,134,007	+		Pf6N2E2_2661	0.13	-0.6
3,134,007	+		Pf6N2E2_2661	0.13	+0.9
3,134,007	+		Pf6N2E2_2661	0.13	-0.1
3,134,007	+		Pf6N2E2_2661	0.13	-0.1
3,134,007	+		Pf6N2E2_2661	0.13	-1.1
3,134,008	-		Pf6N2E2_2661	0.13	+0.9
3,134,008	-		Pf6N2E2_2661	0.13	+0.9
3,134,008	-		Pf6N2E2_2661	0.13	-0.1
3,134,016	+		Pf6N2E2_2661	0.14	-0.1
3,134,016	+		Pf6N2E2_2661	0.14	-0.6
3,134,016	+		Pf6N2E2_2661	0.14	-0.9
3,134,017	-		Pf6N2E2_2661	0.14	-0.1
3,134,017	-		Pf6N2E2_2661	0.14	-1.6
3,134,356	-		Pf6N2E2_2661	0.43	-0.1
3,134,356	-		Pf6N2E2_2661	0.43	-1.6
3,134,484	+		Pf6N2E2_2661	0.53	-2.1
3,134,484	+		Pf6N2E2_2661	0.53	-0.5
3,134,484	+		Pf6N2E2_2661	0.53	-0.1
3,134,485	-		Pf6N2E2_2661	0.54	+0.9
3,134,485	-		Pf6N2E2_2661	0.54	-0.1
3,134,494	-		Pf6N2E2_2661	0.54	-0.5
3,134,505	+		Pf6N2E2_2661	0.55	+0.9
3,134,505	+		Pf6N2E2_2661	0.55	+0.9
3,134,506	-		Pf6N2E2_2661	0.55	-0.4
3,134,506	-		Pf6N2E2_2661	0.55	+0.9
3,134,699	-		Pf6N2E2_2661	0.72	+0.9
3,135,100	+				+0.9
3,135,100	+				-0.4
3,135,100	+				-0.1
3,135,101	-				-0.2
3,135,101	-				-0.6
3,135,242	-		Pf6N2E2_2662	0.15	+0.9
3,135,242	-		Pf6N2E2_2662	0.15	+0.9
3,135,244	+		Pf6N2E2_2662	0.15	-0.1
3,135,244	+		Pf6N2E2_2662	0.15	+0.9
3,135,244	+		Pf6N2E2_2662	0.15	+0.9
3,135,244	+		Pf6N2E2_2662	0.15	-0.4
3,135,245	-		Pf6N2E2_2662	0.15	+0.4
3,135,245	-		Pf6N2E2_2662	0.15	-0.1
3,135,245	-		Pf6N2E2_2662	0.15	-1.1
3,135,245	-		Pf6N2E2_2662	0.15	+0.9
3,135,245	-		Pf6N2E2_2662	0.15	+0.9
3,135,245	-		Pf6N2E2_2662	0.15	-0.1
3,135,245	-		Pf6N2E2_2662	0.15	-0.9
3,135,245	-		Pf6N2E2_2662	0.15	+0.9
3,135,245	-		Pf6N2E2_2662	0.15	+0.2
3,135,245	-		Pf6N2E2_2662	0.15	+0.9
3,135,248	-		Pf6N2E2_2662	0.15	+0.9
3,135,310	+		Pf6N2E2_2662	0.19	+0.9
3,135,310	+		Pf6N2E2_2662	0.19	-1.1
3,135,310	+		Pf6N2E2_2662	0.19	-0.6
3,135,310	+		Pf6N2E2_2662	0.19	-0.6
3,135,311	-		Pf6N2E2_2662	0.19	+0.9
3,135,311	-		Pf6N2E2_2662	0.19	+0.9
3,135,313	+		Pf6N2E2_2662	0.19	-0.6
3,135,314	-		Pf6N2E2_2662	0.20	-0.1
3,135,314	-		Pf6N2E2_2662	0.20	-0.8
3,135,314	-		Pf6N2E2_2662	0.20	-0.2
3,135,373	+		Pf6N2E2_2662	0.24	-0.1
3,135,694	-		Pf6N2E2_2662	0.46	-0.6
3,135,781	+		Pf6N2E2_2662	0.52	+0.9
3,135,781	+		Pf6N2E2_2662	0.52	+0.9