Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2443

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,893,975	+		Pf6N2E2_2442	0.62	-0.6
2,893,975	+		Pf6N2E2_2442	0.62	+1.0
2,893,975	+		Pf6N2E2_2442	0.62	-1.6
2,893,975	+		Pf6N2E2_2442	0.62	-0.0
2,893,975	+		Pf6N2E2_2442	0.62	-0.6
2,893,975	+		Pf6N2E2_2442	0.62	-1.0
2,893,976	-		Pf6N2E2_2442	0.62	+1.0
2,893,976	-		Pf6N2E2_2442	0.62	+1.0
2,893,976	-		Pf6N2E2_2442	0.62	-0.0
2,894,182	+		Pf6N2E2_2442	0.71	-0.6
2,894,182	+		Pf6N2E2_2442	0.71	-0.0
2,894,182	+		Pf6N2E2_2442	0.71	+1.0
2,894,182	+		Pf6N2E2_2442	0.71	-0.0
2,894,183	-		Pf6N2E2_2442	0.71	-1.0
2,894,309	-		Pf6N2E2_2442	0.77	+1.0
2,894,357	+		Pf6N2E2_2442	0.79	-1.0
2,894,357	+		Pf6N2E2_2442	0.79	+1.0
2,894,357	+		Pf6N2E2_2442	0.79	+1.0
2,894,357	+		Pf6N2E2_2442	0.79	+1.0
2,894,358	-		Pf6N2E2_2442	0.79	-0.9
2,894,393	-		Pf6N2E2_2442	0.80	+1.0
2,894,773	+				+1.0
2,894,773	+				-0.0
2,894,835	+				-0.2
2,894,836	-				-0.0
2,895,084	-		Pf6N2E2_2443	0.54	+1.0
2,895,166	-		Pf6N2E2_2443	0.72	+1.0
2,895,207	+		Pf6N2E2_2443	0.81	-0.0
2,895,208	-		Pf6N2E2_2443	0.81	-0.8
2,895,208	-		Pf6N2E2_2443	0.81	-0.0
2,895,237	+		Pf6N2E2_2443	0.87	-1.6
2,895,237	+		Pf6N2E2_2443	0.87	-2.3
2,895,237	+		Pf6N2E2_2443	0.87	+1.0
2,895,238	-		Pf6N2E2_2443	0.87	+1.0
2,895,444	+		Pf6N2E2_2444	0.31	+1.0
2,895,445	-		Pf6N2E2_2444	0.31	+1.0
2,895,445	-		Pf6N2E2_2444	0.31	+1.0
2,895,445	-		Pf6N2E2_2444	0.31	+1.0
2,895,621	-				-0.6
2,895,621	-		Pf6N2E2_2444	0.68	+1.0
2,895,650	+		Pf6N2E2_2444	0.74	+1.0
2,895,650	+		Pf6N2E2_2444	0.74	-0.6
2,895,651	-		Pf6N2E2_2444	0.74	+0.7
2,895,797	+				-0.4
2,895,924	+				+1.0
2,896,214	+		Pf6N2E2_2445	0.46	-0.0
2,896,292	+		Pf6N2E2_2445	0.66	-0.0
2,896,292	+		Pf6N2E2_2445	0.66	-0.5